Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Procavia_20capensis_20[genbank_20GCA_5F000152225.2_202014-12-16]
65,694 sequences; 3,602,182,911 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq64022 473 4e-131
seq41692 473 4e-131
seq2996 455 1e-125
seq427 351 3e-94
seq1852 273 7e-71
seq239 224 3e-56
seq3651 181 3e-43
seq1075 174 5e-41
seq10090 172 2e-40
seq241 168 2e-39
seq49265 165 3e-38
seq176 141 3e-31
seq632 122 3e-25
seq4121 120 1e-24
seq13281 114 4e-23
seq193 114 4e-23
seq213 109 2e-21
seq11439 104 8e-20
seq2501 86.0 2e-14
seq653 82.4 2e-13
seq41693 78.8 3e-12
seq1049 77.0 1e-11
>seq64022
Length=1274
Score = 473 bits (524), Expect = 4e-131
Identities = 283/297 (95%), Gaps = 0/297 (0%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 932 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 991
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 992 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 1051
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1052 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 1111
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1112 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 1171
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1172 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 1228
Score = 118 bits (130), Expect = 3e-24
Identities = 103/128 (80%), Gaps = 5/128 (4%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 632 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 691
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||| |||| ||| ||||||||| ||||||||||||||| || |||| |||||| |
Sbjct 692 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC-----CCCGGAGC 746
Query 127 GGCCCGCG 134
|| ||||
Sbjct 747 GGGTCGCG 754
>seq41692
Length=2926
Score = 473 bits (524), Expect = 4e-131
Identities = 283/297 (95%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 1546 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 1487
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1486 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 1427
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1426 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 1367
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1366 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 1307
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1306 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 1250
Score = 118 bits (130), Expect = 3e-24
Identities = 103/128 (80%), Gaps = 5/128 (4%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 1846 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 1787
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||| |||| ||| ||||||||| ||||||||||||||| || |||| |||||| |
Sbjct 1786 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC-----CCCGGAGC 1732
Query 127 GGCCCGCG 134
|| ||||
Sbjct 1731 GGGTCGCG 1724
>seq2996
Length=968480
Score = 455 bits (504), Expect = 1e-125
Identities = 279/297 (94%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 514948 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 514889
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
Sbjct 514888 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCTGTTCCCTTGGCTGTGGTTTTGCTGG 514829
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
|||| || |||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 514828 ATAGGAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGTGTCACTAATTAGATG 514769
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 514768 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 514709
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 514708 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 514652
>seq427
Length=3234900
Score = 351 bits (388), Expect = 3e-94
Identities = 253/289 (88%), Gaps = 5/289 (2%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||| ||||| | ||| ||||| | | | | ||| |||||||||| |
Sbjct 1645718 CTCCCACTTATTCTACCCCTCTGATGTCTCTTCACCATGCCAGGCTACAGTCAAGCTCCA 1645777
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG-CTA 355
|||||||||||||||| || |||||||||||||| ||||||||||||| ||||| | |
Sbjct 1645778 CAGGGTCTTCTTTCCCTGCAGATTCCGCCAAGCCTGTTCCCTTGGCTGCGGTTTTGCCCG 1645837
Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC---GCGTCACTAATTA 412
|||||||| || ||||||||||||||||||| |||||||||||| ||||||||| |||
Sbjct 1645838 GATAGTAGGTAAGGACAGTGGGAATCTCGTTCATCCATTCATGCGTGGCGTCACTAGTTA 1645897
Query 413 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC 472
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1645898 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTCACCCGTGC 1645957
Query 473 TTGGTTGAATTTCTTCAC-TTTGACATTCAGAGCACTGGGCAGAAATCA 520
|| || ||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1645958 TTCATTCGGTTTATTCACTTTTGACATTCAGAGCACTGGGCAGAAATCA 1646006
>seq1852
Length=1880878
Score = 273 bits (302), Expect = 7e-71
Identities = 225/274 (82%), Gaps = 0/274 (0%)
Strand=Plus/Plus
Query 250 TACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTT 309
||||||||||| ||| |||| | || ||||| ||||||||||| |||||||||
Sbjct 1481804 TACACCTCTCATGTCTCTTCATGGTACCAGAGTAGAGGCAAGCTCAACACAGTCTTCTTT 1481863
Query 310 CCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG 369
||| ||||||| | ||||||| |||| |||||||||| ||| ||| | |||| || ||||
Sbjct 1481864 CCCTGCTGATTTCTCCAAGCCTGTTCTCTTGGCTGTGATTTTGCTGGGTAGTTGACAGGG 1481923
Query 370 ACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 429
|||||||||||||| | |||||||||| | |||||||||||||| | ||| |||||||
Sbjct 1481924 ACAGTGGGAATCTCAGTCATCCATTCATATGTGTCACTAATTAGATAATGAGCCATTTGG 1481983
Query 430 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489
|| ||||||||| ||||||||||||||| | |||||| |||| ||||||||||||
Sbjct 1481984 CTGCCTTAAGAGGGTCATAGTTACTCCCACTATTTACCTATGCTTCACTGAATTTCTTCA 1482043
Query 490 CTTTGACATTCAGAGCACTGGGCAGAAATCACAT 523
||||||||||| | ||||||||| ||||| ||||
Sbjct 1482044 CTTTGACATTCTGGGCACTGGGCTGAAATTACAT 1482077
>seq239
Length=1158836
Score = 224 bits (248), Expect = 3e-56
Identities = 173/206 (84%), Gaps = 7/206 (3%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| | |||||| | | |||||||||| | |||||
Sbjct 574490 CTCCCACTTATTCTACACCTCTCACATGTCTTCACAGTGCCAGACTAGAGTCGAACTCAA 574549
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||| ||||||||| || ||||||| ||||||||||||||||||||||||||||| || |
Sbjct 574550 CAGGTTCTTCTTTCTCCACTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCACTGG 574609
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||| ||| ||||||||||||| ||| | |||| ||| ||||||||
Sbjct 574610 ATAGTAGGTAGGAACATTGGGAATCTCGTTCATCTACTCATACGC-------ATTAGATG 574662
Query 417 ACGAGGCATTTGGCTACCTTAAGAGA 442
| |||||||||||||||||||||||
Sbjct 574663 AGAAGGCATTTGGCTACCTTAAGAGA 574688
>seq3651
Length=326744
Score = 181 bits (200), Expect = 3e-43
Identities = 186/244 (76%), Gaps = 22/244 (9%)
Strand=Plus/Plus
Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338
||||||||||||||||| |||| | |||||| | ||||| ||| ||||||
Sbjct 44856 GACTAGAGTCAAGCTCAGCAGGCTGTTCTTTTTCTGCTGACTCCT--------GTTCCCC 44907
Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATA-GGGACAGTGGGAATCTCGTTAATCCATTCAT 397
||||||||| | |||||| | |||| ||||||| || | | |||| || |
Sbjct 44908 TGGCTGTGG---------AGAGTAGACAAGGGAGAGTGGGAGACTTGGTTATCCGCTCTT 44958
Query 398 GCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 457
| | |||||| |||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 44959 GTGTGTCACTGATTAGATGACGAGGCATTTGGCTACCTTAAAAGAGTCATGGTTACTCCT 45018
Query 458 GCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 517
| | |||||| | || || | |||||||| ||||| |||||||||||| |||||||
Sbjct 45019 GACATTTACC----CATGCTTCATTTTCTTCAGTTTGATGTTCAGAGCACTGAGCAGAAA 45074
Query 518 TCAC 521
||||
Sbjct 45075 TCAC 45078
>seq1075
Length=921760
Score = 174 bits (192), Expect = 5e-41
Identities = 183/237 (77%), Gaps = 8/237 (3%)
Strand=Plus/Plus
Query 289 AAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGT 348
|| |||||||||||||||||| || | ||||| | |||| | ||| ||||||||||||
Sbjct 39920 AAACTCAACAGGGTCTTCTTTACCTGTTGATTTCAGCAAGTTCTTTCACTTGGCTGTGGT 39979
Query 349 TTCGCTAGATAGTAGAT-AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 407
||| | |||||||| | || ||| ||| |||||| || |||||| || | | ||| ||
Sbjct 39980 TTCA-TGGATAGTAGGTGAGAGACCATGGAAATCTCATTCATCCATGCACGGGTGTCTCT 40038
Query 408 AATTAGATGACGAGGCATTTGGC-TACCTTAAG-----AGAGTCATAGTTACTCCCGCCG 461
||||||||||||||||||||| | ||| | ||||||||| ||||| || | |
Sbjct 40039 AATTAGATGACGAGGCATTTGCAATGGCTTTTGGGTGGAGAGTCATAATTACTGCCACAG 40098
Query 462 TTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518
|||| | | || |||||||||||||| |||| ||||||| |||||||||||||
Sbjct 40099 TTTATCTTGGTTTCACTGAATTTCTTCACTGTGACTTTCAGAGAACTGGGCAGAAAT 40155
>seq10090
Length=13408
Score = 172 bits (190), Expect = 2e-40
Identities = 133/158 (84%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 285 AGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG 344
||||||||| || | ||||| ||||||| |||| ||| ||||||| ||||||||||||
Sbjct 7162 AGTCAAGCTTAAAAAGGTCTCTTTTCCCCACTGACTCCACCAAGCCTATTCCCTTGGCTG 7221
Query 345 TGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 404
|||||| || || ||||| ||||||||||||||||||| || |||||||||||| |||
Sbjct 7222 CGGTTTCACTGGACAGTAGGTAGGGACAGTGGGAATCTCTTTGATCCATTCATGCACGTT 7281
Query 405 ACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGA 442
||||||| | ||| |||| ||||| ||||||||||||
Sbjct 7282 GCTAATTAAACGACAAGGCCTTTGGTTACCTTAAGAGA 7319
>seq241
Length=1966128
Score = 168 bits (186), Expect = 2e-39
Identities = 134/161 (83%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|| ||||||||||| || |||| ||| ||||| | | | ||||||||||| ||||||
Sbjct 1623058 CTTCCACTTATTCTGTACTTCTCGTGTCTCTTCACCATGCCAGACTAGAGTCAGGCTCAA 1622999
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||| |||| ||||||||| |||| || ||||| ||||||||| |||| || |
Sbjct 1622998 CAGGGTCTTCCTTCCAGGCTGATTCCACCAACCCTGTTCCTTTGGCTGTGATTTCACTGG 1622939
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCAT 397
||||| | |||| ||||||||||||||||| ||||||||||
Sbjct 1622938 ATAGTTGGTAGGAACAGTGGGAATCTCGTTCATCCATTCAT 1622898
>seq49265
Length=1525
Score = 165 bits (182), Expect = 3e-38
Identities = 137/164 (84%), Gaps = 10/164 (6%)
Strand=Plus/Minus
Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338
|||||||||| | |||| |||| ||| ||||| || ||||||| |||||||||||||| |
Sbjct 1522 GACTAGAGTCGAACTCA-CAGGTTCT-CTTTCTCCACTGATTCTGCCAAGCCCGTTCC-T 1466
Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398
||||||||||||| || |||||||| |||| ||| ||||||||||||| ||| | ||||
Sbjct 1465 TGGCTGTGGTTTCACTGGATAGTAGGTAGGAACATTGGGAATCTCGTTCATCTACTCATA 1406
Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGA 442
||| ||||||||| |||||||||||||||||||||||
Sbjct 1405 CGC-------ATTAGATGAGAAGGCATTTGGCTACCTTAAGAGA 1369
>seq176
Length=2424219
Score = 141 bits (156), Expect = 3e-31
Identities = 183/255 (72%), Gaps = 22/255 (9%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAG----TCATTTCACAAAGTCGGACTAGAGTCAAGC 292
||||||||| ||| ||||||||| | |||| | || || ||| ||||||||
Sbjct 694827 CTCCCACTTGTTCCACACCTCTCTATCTCCTCATGTTGCAGAG-----CTAAAGTCAAGC 694881
Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352
|||| || ||||||||||||| ||||| || |||||||||||||||
Sbjct 694882 TCAATAGAGTCTTCTTTCCCC-------------AGCCCATTATCTTGGCTGTGGTTTCA 694928
Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412
|| |||||||| |||||||||||||||||| | ||||||||| ||| ||||||
Sbjct 694929 CTGGATAGTAGGCAGGGACAGTGGGAATCTCATCCATCCATTCACATTACTCATTAATTA 694988
Query 413 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC 472
||| || ||||| | || | ||||||||| | |||||| ||| | ||||| ||
Sbjct 694989 GATAACCAGGCACTGGGATGCCTTAAGAGGGCTGTAGTTATTCCATCTACTTACCTATGC 695048
Query 473 TTGGTTGAATTTCTT 487
|| | ||||| ||||
Sbjct 695049 TTTGCTGAATGTCTT 695063
>seq632
Length=1235852
Score = 122 bits (134), Expect = 3e-25
Identities = 132/175 (75%), Gaps = 4/175 (2%)
Strand=Plus/Plus
Query 343 TGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCG 402
||||||||| |||| ||||| ||||||||| || | |||||||||||| |
Sbjct 957500 TGTGGTTTCATCAGATTACAGATAAAATCAGTGGGAAAGTCATCCATCCATTCATGCATG 957559
Query 403 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT 462
| | ||||||||| | ||||||||||||||| | ||||||| |||||| ||| |||
Sbjct 957560 T----AGTTAGATGACAAAGCATTTGGCTACCTTGAAAGAGTCACAGTTACACCCATCGT 957615
Query 463 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 517
||||| |||| |||||||||||| || | | ||||||| ||| || |||||
Sbjct 957616 TTACCTAGGCTTCTGTGAATTTCTTCAATTAGGCTTTCAGAGTACTAGGAAGAAA 957670
>seq4121
Length=95487
Score = 120 bits (132), Expect = 1e-24
Identities = 72/76 (95%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415
|||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 23400 GATAGTAGGTACGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGAT 23341
Query 416 GACGAGGCATTTGGCT 431
||| ||||||||||||
Sbjct 23340 GACAAGGCATTTGGCT 23325
>seq13281
Length=4256
Score = 114 bits (126), Expect = 4e-23
Identities = 131/175 (75%), Gaps = 7/175 (4%)
Strand=Plus/Plus
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||| |||||||||||| | || ||| ||||||||| | | ||||||||||| ||
Sbjct 1619 AGTAGGTAGGGACAGTGGAGACCTAGTTCATCCATTCACCTGTGGCACTAATTAGACAAC 1678
Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478
||||||||| || |||||||||||||| ||||||| ||| ||||| | ||| | |
Sbjct 1679 AAGGCATTTGCCTGTCTTAAGAGAGTCAT-GTTACTCACGCTGTTTATTCATGCTCCGCT 1737
Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|| |||| ||||| | ||| || |||||||||||||| || || |||
Sbjct 1738 GACTTTC------TTGACGGTGAGAACATGGGGCAGAAATCACACAGCATCCACA 1786
>seq193
Length=2088592
Score = 114 bits (126), Expect = 4e-23
Identities = 131/175 (75%), Gaps = 7/175 (4%)
Strand=Plus/Plus
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||| |||||||||||| | || ||| ||||||||| | | |||||||||| ||
Sbjct 1577670 AGTAGGTAGGGACAGTGGAGACCTAGTTCATCCATTCACCTGTGGCACTAATTAGGCAAC 1577729
Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478
||||||||| || |||||||||||||| ||||||| ||| ||||| | ||| | |
Sbjct 1577730 AAGGCATTTGCCTGTCTTAAGAGAGTCAT-GTTACTCACGCTGTTTATTCATGCTCCGCT 1577788
Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|| |||| ||||| | ||| ||| |||||||||||||| || || |||
Sbjct 1577789 GACTTTC------TTGACGGTGAGAACACGGGGCAGAAATCACACAGCATCCACA 1577837
>seq213
Length=3388292
Score = 109 bits (120), Expect = 2e-21
Identities = 143/196 (73%), Gaps = 18/196 (9%)
Strand=Plus/Plus
Query 241 CACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGG 300
||||| ||||| | ||||| ||| ||||| | | ||||| | ||||| ||
Sbjct 2736223 CACTTGTTCTATGCTTCTCATGTCTCTTCACTGTGCCAGACTACAATCAAGTG-----GG 2736277
Query 301 GTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG-TGGTTTCGCTAGATA 359
||||||||||||| ||||||| ||||| || ||||||||||||| || |||| || ||||
Sbjct 2736278 GTCTTCTTTCCCCACTGATTCAGCCAACCCTGTTCCCTTGGCTGTTGTTTTCACTGGATA 2736337
Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419
||||||| || ||||| ||| || |||| | | ||||| || |||||| |
Sbjct 2736338 GTAGATAATGATAGTGGAAATTTC----------TCATACACATCACT-ATCAGATGAGG 2736386
Query 420 AGGCATTTGGCTACCT 435
| || ||||||||||
Sbjct 2736387 AAACA-TTGGCTACCT 2736401
>seq11439
Length=4986
Score = 104 bits (114), Expect = 8e-20
Identities = 84/102 (82%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| ||||| | ||||||| |||||| ||||
Sbjct 137 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGTTCGCCTTAGGTCACCTGTGTTACC 196
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA 108
|||| |||| ||| ||||||||| | ||||||||||||| ||
Sbjct 197 GTTTGACAGGTGTACCGCCCCAGTCGAACTCCCCACCTGGCA 238
Score = 104 bits (114), Expect = 8e-20
Identities = 84/102 (82%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| ||||| | ||||||| |||||||||||
Sbjct 603 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGTTCGCCTTAGGTCACCTGCGTTACC 662
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA 108
||| |||| ||| | ||||||| ||||||||||||||| ||
Sbjct 663 ATTTGACAGGTGTACGGCCCCAGTCAAACTCCCCACCTGGCA 704
>seq2501
Length=392052
Score = 86.0 bits (94), Expect = 2e-14
Identities = 81/101 (80%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497
|||||||||| ||||||| | ||||||| | |||| ||| ||||||| |||||||
Sbjct 156943 AGAGAGTCATGGTTACTCGTGA-GTTTACCTGTGCTTAACTGATTTTCTTCTCTTTGACT 157001
Query 498 TTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA-TCAC 537
|||||||||||||||||| | |||| | |||||| ||||
Sbjct 157002 CTCAGAGCACTGGGCAGAAGTGACATCACATCAACACTCAC 157042
>seq653
Length=869004
Score = 82.4 bits (90), Expect = 2e-13
Identities = 90/120 (75%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||| ||| ||||| | | | || |||| ||||||||
Sbjct 199895 CTCCCACTTATTCTACACCTTCTGTGTCTCTTCACCACGCCAGATTAGAAGCAAGCTCAG 199954
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||| ||||| | |||| ||| || |||| | ||| || |||| |||| ||||
Sbjct 199955 CAGGGTCTCCTTTCTCTGCTGTTTCAGCTAAGCTCATTCTCTCGGCTACAGTTTTTCTAG 200014
>seq41693
Length=1290
Score = 78.8 bits (86), Expect = 3e-12
Identities = 64/78 (82%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 173 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 114
Query 67 GTTTAACAGATGTGCCGC 84
|||| |||| ||| ||||
Sbjct 113 GTTTGACAGGTGTACCGC 96
>seq1049
Length=992952
Score = 77.0 bits (84), Expect = 1e-11
Identities = 51/57 (89%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 411 TAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACC 467
|||||||| ||||||||||||||||||| ||||||| ||||| ||| || |||||||
Sbjct 18577 TAGATGACAAGGCATTTGGCTACCTTAAAAGAGTCACAGTTAATCCTGCTGTTTACC 18521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634125771712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |