Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Procavia_20capensis_20[genbank_20GCA_5F000152225.2_202014-12-16] 65,694 sequences; 3,602,182,911 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq64022 473 4e-131 seq41692 473 4e-131 seq2996 455 1e-125 seq427 351 3e-94 seq1852 273 7e-71 seq239 224 3e-56 seq3651 181 3e-43 seq1075 174 5e-41 seq10090 172 2e-40 seq241 168 2e-39 seq49265 165 3e-38 seq176 141 3e-31 seq632 122 3e-25 seq4121 120 1e-24 seq13281 114 4e-23 seq193 114 4e-23 seq213 109 2e-21 seq11439 104 8e-20 seq2501 86.0 2e-14 seq653 82.4 2e-13 seq41693 78.8 3e-12 seq1049 77.0 1e-11 >seq64022 Length=1274 Score = 473 bits (524), Expect = 4e-131 Identities = 283/297 (95%), Gaps = 0/297 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 932 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 991 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 992 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 1051 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1052 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 1111 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1112 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 1171 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1172 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 1228 Score = 118 bits (130), Expect = 3e-24 Identities = 103/128 (80%), Gaps = 5/128 (4%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 632 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 691 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || |||| |||||| | Sbjct 692 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC-----CCCGGAGC 746 Query 127 GGCCCGCG 134 || |||| Sbjct 747 GGGTCGCG 754 >seq41692 Length=2926 Score = 473 bits (524), Expect = 4e-131 Identities = 283/297 (95%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 1546 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 1487 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1486 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 1427 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1426 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 1367 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1366 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 1307 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1306 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 1250 Score = 118 bits (130), Expect = 3e-24 Identities = 103/128 (80%), Gaps = 5/128 (4%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 1846 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 1787 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || |||| |||||| | Sbjct 1786 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC-----CCCGGAGC 1732 Query 127 GGCCCGCG 134 || |||| Sbjct 1731 GGGTCGCG 1724 >seq2996 Length=968480 Score = 455 bits (504), Expect = 1e-125 Identities = 279/297 (94%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 514948 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 514889 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| | Sbjct 514888 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCTGTTCCCTTGGCTGTGGTTTTGCTGG 514829 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||| || |||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 514828 ATAGGAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGTGTCACTAATTAGATG 514769 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 514768 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 514709 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 514708 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 514652 >seq427 Length=3234900 Score = 351 bits (388), Expect = 3e-94 Identities = 253/289 (88%), Gaps = 5/289 (2%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||| ||||| | ||| ||||| | | | | ||| |||||||||| | Sbjct 1645718 CTCCCACTTATTCTACCCCTCTGATGTCTCTTCACCATGCCAGGCTACAGTCAAGCTCCA 1645777 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG-CTA 355 |||||||||||||||| || |||||||||||||| ||||||||||||| ||||| | | Sbjct 1645778 CAGGGTCTTCTTTCCCTGCAGATTCCGCCAAGCCTGTTCCCTTGGCTGCGGTTTTGCCCG 1645837 Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC---GCGTCACTAATTA 412 |||||||| || ||||||||||||||||||| |||||||||||| ||||||||| ||| Sbjct 1645838 GATAGTAGGTAAGGACAGTGGGAATCTCGTTCATCCATTCATGCGTGGCGTCACTAGTTA 1645897 Query 413 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC 472 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 1645898 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTCACCCGTGC 1645957 Query 473 TTGGTTGAATTTCTTCAC-TTTGACATTCAGAGCACTGGGCAGAAATCA 520 || || ||| ||||| |||||||||||||||||||||||||||||| Sbjct 1645958 TTCATTCGGTTTATTCACTTTTGACATTCAGAGCACTGGGCAGAAATCA 1646006 >seq1852 Length=1880878 Score = 273 bits (302), Expect = 7e-71 Identities = 225/274 (82%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 250 TACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTT 309 ||||||||||| ||| |||| | || ||||| ||||||||||| ||||||||| Sbjct 1481804 TACACCTCTCATGTCTCTTCATGGTACCAGAGTAGAGGCAAGCTCAACACAGTCTTCTTT 1481863 Query 310 CCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG 369 ||| ||||||| | ||||||| |||| |||||||||| ||| ||| | |||| || |||| Sbjct 1481864 CCCTGCTGATTTCTCCAAGCCTGTTCTCTTGGCTGTGATTTTGCTGGGTAGTTGACAGGG 1481923 Query 370 ACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 429 |||||||||||||| | |||||||||| | |||||||||||||| | ||| ||||||| Sbjct 1481924 ACAGTGGGAATCTCAGTCATCCATTCATATGTGTCACTAATTAGATAATGAGCCATTTGG 1481983 Query 430 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489 || ||||||||| ||||||||||||||| | |||||| |||| |||||||||||| Sbjct 1481984 CTGCCTTAAGAGGGTCATAGTTACTCCCACTATTTACCTATGCTTCACTGAATTTCTTCA 1482043 Query 490 CTTTGACATTCAGAGCACTGGGCAGAAATCACAT 523 ||||||||||| | ||||||||| ||||| |||| Sbjct 1482044 CTTTGACATTCTGGGCACTGGGCTGAAATTACAT 1482077 >seq239 Length=1158836 Score = 224 bits (248), Expect = 3e-56 Identities = 173/206 (84%), Gaps = 7/206 (3%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| | |||||| | | |||||||||| | ||||| Sbjct 574490 CTCCCACTTATTCTACACCTCTCACATGTCTTCACAGTGCCAGACTAGAGTCGAACTCAA 574549 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||| ||||||||| || ||||||| ||||||||||||||||||||||||||||| || | Sbjct 574550 CAGGTTCTTCTTTCTCCACTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCACTGG 574609 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||| ||| ||||||||||||| ||| | |||| ||| |||||||| Sbjct 574610 ATAGTAGGTAGGAACATTGGGAATCTCGTTCATCTACTCATACGC-------ATTAGATG 574662 Query 417 ACGAGGCATTTGGCTACCTTAAGAGA 442 | ||||||||||||||||||||||| Sbjct 574663 AGAAGGCATTTGGCTACCTTAAGAGA 574688 >seq3651 Length=326744 Score = 181 bits (200), Expect = 3e-43 Identities = 186/244 (76%), Gaps = 22/244 (9%) Strand=Plus/Plus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 ||||||||||||||||| |||| | |||||| | ||||| ||| |||||| Sbjct 44856 GACTAGAGTCAAGCTCAGCAGGCTGTTCTTTTTCTGCTGACTCCT--------GTTCCCC 44907 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATA-GGGACAGTGGGAATCTCGTTAATCCATTCAT 397 ||||||||| | |||||| | |||| ||||||| || | | |||| || | Sbjct 44908 TGGCTGTGG---------AGAGTAGACAAGGGAGAGTGGGAGACTTGGTTATCCGCTCTT 44958 Query 398 GCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 457 | | |||||| |||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 44959 GTGTGTCACTGATTAGATGACGAGGCATTTGGCTACCTTAAAAGAGTCATGGTTACTCCT 45018 Query 458 GCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 517 | | |||||| | || || | |||||||| ||||| |||||||||||| ||||||| Sbjct 45019 GACATTTACC----CATGCTTCATTTTCTTCAGTTTGATGTTCAGAGCACTGAGCAGAAA 45074 Query 518 TCAC 521 |||| Sbjct 45075 TCAC 45078 >seq1075 Length=921760 Score = 174 bits (192), Expect = 5e-41 Identities = 183/237 (77%), Gaps = 8/237 (3%) Strand=Plus/Plus Query 289 AAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGT 348 || |||||||||||||||||| || | ||||| | |||| | ||| |||||||||||| Sbjct 39920 AAACTCAACAGGGTCTTCTTTACCTGTTGATTTCAGCAAGTTCTTTCACTTGGCTGTGGT 39979 Query 349 TTCGCTAGATAGTAGAT-AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 407 ||| | |||||||| | || ||| ||| |||||| || |||||| || | | ||| || Sbjct 39980 TTCA-TGGATAGTAGGTGAGAGACCATGGAAATCTCATTCATCCATGCACGGGTGTCTCT 40038 Query 408 AATTAGATGACGAGGCATTTGGC-TACCTTAAG-----AGAGTCATAGTTACTCCCGCCG 461 ||||||||||||||||||||| | ||| | ||||||||| ||||| || | | Sbjct 40039 AATTAGATGACGAGGCATTTGCAATGGCTTTTGGGTGGAGAGTCATAATTACTGCCACAG 40098 Query 462 TTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 |||| | | || |||||||||||||| |||| ||||||| ||||||||||||| Sbjct 40099 TTTATCTTGGTTTCACTGAATTTCTTCACTGTGACTTTCAGAGAACTGGGCAGAAAT 40155 >seq10090 Length=13408 Score = 172 bits (190), Expect = 2e-40 Identities = 133/158 (84%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 285 AGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG 344 ||||||||| || | ||||| ||||||| |||| ||| ||||||| |||||||||||| Sbjct 7162 AGTCAAGCTTAAAAAGGTCTCTTTTCCCCACTGACTCCACCAAGCCTATTCCCTTGGCTG 7221 Query 345 TGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 404 |||||| || || ||||| ||||||||||||||||||| || |||||||||||| ||| Sbjct 7222 CGGTTTCACTGGACAGTAGGTAGGGACAGTGGGAATCTCTTTGATCCATTCATGCACGTT 7281 Query 405 ACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGA 442 ||||||| | ||| |||| ||||| |||||||||||| Sbjct 7282 GCTAATTAAACGACAAGGCCTTTGGTTACCTTAAGAGA 7319 >seq241 Length=1966128 Score = 168 bits (186), Expect = 2e-39 Identities = 134/161 (83%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 || ||||||||||| || |||| ||| ||||| | | | ||||||||||| |||||| Sbjct 1623058 CTTCCACTTATTCTGTACTTCTCGTGTCTCTTCACCATGCCAGACTAGAGTCAGGCTCAA 1622999 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||| |||| ||||||||| |||| || ||||| ||||||||| |||| || | Sbjct 1622998 CAGGGTCTTCCTTCCAGGCTGATTCCACCAACCCTGTTCCTTTGGCTGTGATTTCACTGG 1622939 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCAT 397 ||||| | |||| ||||||||||||||||| |||||||||| Sbjct 1622938 ATAGTTGGTAGGAACAGTGGGAATCTCGTTCATCCATTCAT 1622898 >seq49265 Length=1525 Score = 165 bits (182), Expect = 3e-38 Identities = 137/164 (84%), Gaps = 10/164 (6%) Strand=Plus/Minus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 |||||||||| | |||| |||| ||| ||||| || ||||||| |||||||||||||| | Sbjct 1522 GACTAGAGTCGAACTCA-CAGGTTCT-CTTTCTCCACTGATTCTGCCAAGCCCGTTCC-T 1466 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 ||||||||||||| || |||||||| |||| ||| ||||||||||||| ||| | |||| Sbjct 1465 TGGCTGTGGTTTCACTGGATAGTAGGTAGGAACATTGGGAATCTCGTTCATCTACTCATA 1406 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGA 442 ||| ||||||||| ||||||||||||||||||||||| Sbjct 1405 CGC-------ATTAGATGAGAAGGCATTTGGCTACCTTAAGAGA 1369 >seq176 Length=2424219 Score = 141 bits (156), Expect = 3e-31 Identities = 183/255 (72%), Gaps = 22/255 (9%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAG----TCATTTCACAAAGTCGGACTAGAGTCAAGC 292 ||||||||| ||| ||||||||| | |||| | || || ||| |||||||| Sbjct 694827 CTCCCACTTGTTCCACACCTCTCTATCTCCTCATGTTGCAGAG-----CTAAAGTCAAGC 694881 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 |||| || ||||||||||||| ||||| || ||||||||||||||| Sbjct 694882 TCAATAGAGTCTTCTTTCCCC-------------AGCCCATTATCTTGGCTGTGGTTTCA 694928 Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412 || |||||||| |||||||||||||||||| | ||||||||| ||| |||||| Sbjct 694929 CTGGATAGTAGGCAGGGACAGTGGGAATCTCATCCATCCATTCACATTACTCATTAATTA 694988 Query 413 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC 472 ||| || ||||| | || | ||||||||| | |||||| ||| | ||||| || Sbjct 694989 GATAACCAGGCACTGGGATGCCTTAAGAGGGCTGTAGTTATTCCATCTACTTACCTATGC 695048 Query 473 TTGGTTGAATTTCTT 487 || | ||||| |||| Sbjct 695049 TTTGCTGAATGTCTT 695063 >seq632 Length=1235852 Score = 122 bits (134), Expect = 3e-25 Identities = 132/175 (75%), Gaps = 4/175 (2%) Strand=Plus/Plus Query 343 TGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCG 402 ||||||||| |||| ||||| ||||||||| || | |||||||||||| | Sbjct 957500 TGTGGTTTCATCAGATTACAGATAAAATCAGTGGGAAAGTCATCCATCCATTCATGCATG 957559 Query 403 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT 462 | | ||||||||| | ||||||||||||||| | ||||||| |||||| ||| ||| Sbjct 957560 T----AGTTAGATGACAAAGCATTTGGCTACCTTGAAAGAGTCACAGTTACACCCATCGT 957615 Query 463 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 517 ||||| |||| |||||||||||| || | | ||||||| ||| || ||||| Sbjct 957616 TTACCTAGGCTTCTGTGAATTTCTTCAATTAGGCTTTCAGAGTACTAGGAAGAAA 957670 >seq4121 Length=95487 Score = 120 bits (132), Expect = 1e-24 Identities = 72/76 (95%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 |||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 23400 GATAGTAGGTACGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGAT 23341 Query 416 GACGAGGCATTTGGCT 431 ||| |||||||||||| Sbjct 23340 GACAAGGCATTTGGCT 23325 >seq13281 Length=4256 Score = 114 bits (126), Expect = 4e-23 Identities = 131/175 (75%), Gaps = 7/175 (4%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||| |||||||||||| | || ||| ||||||||| | | ||||||||||| || Sbjct 1619 AGTAGGTAGGGACAGTGGAGACCTAGTTCATCCATTCACCTGTGGCACTAATTAGACAAC 1678 Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478 ||||||||| || |||||||||||||| ||||||| ||| ||||| | ||| | | Sbjct 1679 AAGGCATTTGCCTGTCTTAAGAGAGTCAT-GTTACTCACGCTGTTTATTCATGCTCCGCT 1737 Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 || |||| ||||| | ||| || |||||||||||||| || || ||| Sbjct 1738 GACTTTC------TTGACGGTGAGAACATGGGGCAGAAATCACACAGCATCCACA 1786 >seq193 Length=2088592 Score = 114 bits (126), Expect = 4e-23 Identities = 131/175 (75%), Gaps = 7/175 (4%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||| |||||||||||| | || ||| ||||||||| | | |||||||||| || Sbjct 1577670 AGTAGGTAGGGACAGTGGAGACCTAGTTCATCCATTCACCTGTGGCACTAATTAGGCAAC 1577729 Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478 ||||||||| || |||||||||||||| ||||||| ||| ||||| | ||| | | Sbjct 1577730 AAGGCATTTGCCTGTCTTAAGAGAGTCAT-GTTACTCACGCTGTTTATTCATGCTCCGCT 1577788 Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 || |||| ||||| | ||| ||| |||||||||||||| || || ||| Sbjct 1577789 GACTTTC------TTGACGGTGAGAACACGGGGCAGAAATCACACAGCATCCACA 1577837 >seq213 Length=3388292 Score = 109 bits (120), Expect = 2e-21 Identities = 143/196 (73%), Gaps = 18/196 (9%) Strand=Plus/Plus Query 241 CACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGG 300 ||||| ||||| | ||||| ||| ||||| | | ||||| | ||||| || Sbjct 2736223 CACTTGTTCTATGCTTCTCATGTCTCTTCACTGTGCCAGACTACAATCAAGTG-----GG 2736277 Query 301 GTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG-TGGTTTCGCTAGATA 359 ||||||||||||| ||||||| ||||| || ||||||||||||| || |||| || |||| Sbjct 2736278 GTCTTCTTTCCCCACTGATTCAGCCAACCCTGTTCCCTTGGCTGTTGTTTTCACTGGATA 2736337 Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419 ||||||| || ||||| ||| || |||| | | ||||| || |||||| | Sbjct 2736338 GTAGATAATGATAGTGGAAATTTC----------TCATACACATCACT-ATCAGATGAGG 2736386 Query 420 AGGCATTTGGCTACCT 435 | || |||||||||| Sbjct 2736387 AAACA-TTGGCTACCT 2736401 >seq11439 Length=4986 Score = 104 bits (114), Expect = 8e-20 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| ||||| | ||||||| |||||| |||| Sbjct 137 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGTTCGCCTTAGGTCACCTGTGTTACC 196 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA 108 |||| |||| ||| ||||||||| | ||||||||||||| || Sbjct 197 GTTTGACAGGTGTACCGCCCCAGTCGAACTCCCCACCTGGCA 238 Score = 104 bits (114), Expect = 8e-20 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| ||||| | ||||||| ||||||||||| Sbjct 603 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGTTCGCCTTAGGTCACCTGCGTTACC 662 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA 108 ||| |||| ||| | ||||||| ||||||||||||||| || Sbjct 663 ATTTGACAGGTGTACGGCCCCAGTCAAACTCCCCACCTGGCA 704 >seq2501 Length=392052 Score = 86.0 bits (94), Expect = 2e-14 Identities = 81/101 (80%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497 |||||||||| ||||||| | ||||||| | |||| ||| ||||||| ||||||| Sbjct 156943 AGAGAGTCATGGTTACTCGTGA-GTTTACCTGTGCTTAACTGATTTTCTTCTCTTTGACT 157001 Query 498 TTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA-TCAC 537 |||||||||||||||||| | |||| | |||||| |||| Sbjct 157002 CTCAGAGCACTGGGCAGAAGTGACATCACATCAACACTCAC 157042 >seq653 Length=869004 Score = 82.4 bits (90), Expect = 2e-13 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||| ||| ||||| | | | || |||| |||||||| Sbjct 199895 CTCCCACTTATTCTACACCTTCTGTGTCTCTTCACCACGCCAGATTAGAAGCAAGCTCAG 199954 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||| ||||| | |||| ||| || |||| | ||| || |||| |||| |||| Sbjct 199955 CAGGGTCTCCTTTCTCTGCTGTTTCAGCTAAGCTCATTCTCTCGGCTACAGTTTTTCTAG 200014 >seq41693 Length=1290 Score = 78.8 bits (86), Expect = 3e-12 Identities = 64/78 (82%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 173 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 114 Query 67 GTTTAACAGATGTGCCGC 84 |||| |||| ||| |||| Sbjct 113 GTTTGACAGGTGTACCGC 96 >seq1049 Length=992952 Score = 77.0 bits (84), Expect = 1e-11 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 411 TAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACC 467 |||||||| ||||||||||||||||||| ||||||| ||||| ||| || ||||||| Sbjct 18577 TAGATGACAAGGCATTTGGCTACCTTAAAAGAGTCACAGTTAATCCTGCTGTTTACC 18521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634125771712