Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichechus_20manatus_20latirostris_20[refseq_20GCF_5F000243295.1_202
012-01-23] 6,323 sequences; 3,103,808,406 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq104 154 7e-36
seq221 140 1e-31
seq72 98.7 5e-19
seq5 80.6 1e-13
seq29 71.6 6e-11
>seq104
Length=10432215
Score = 154 bits (170), Expect = 7e-36
Identities = 87/88 (99%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7744650 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 7744591
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCG 88
||||||||||| ||||||||||||||||
Sbjct 7744590 CCGAATCCCCGGCCCGCGGTGGGGCGCG 7744563
>seq221
Length=3734487
Score = 140 bits (154), Expect = 1e-31
Identities = 92/102 (90%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1049665 GGAAAACAAACTAACCGGGATTCCCTCAGTAAGGGCGAGTGAACAGGGAAGAGCCCAGCG 1049606
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
| |||||||| |||| |||||||||| ||| |||| |||||
Sbjct 1049605 CTGAATCCCCACCCCCAGGTGGGGCGCAGGAAATGTAGCGTA 1049564
>seq72
Length=13804493
Score = 98.7 bits (108), Expect = 5e-19
Identities = 86/104 (83%), Gaps = 5/104 (5%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGG--AAGAGCCCAG 58
||||||||||| |||||||||||||||||||| |||||||||||| |||||||||
Sbjct 3194950 GGAAAAGAAACCAACCAGGATTCCCTCAGTAA--TAGAGTGAACAGGGTCAAGAGCCCA- 3194894
Query 59 CGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
|||||| | ||||| ||||||||| | ||| ||||||| ||
Sbjct 3194893 ATACGAATCTCTGCCCCACGGTGGGGCACAGGAAATGTGGCATA 3194850
>seq5
Length=36277496
Score = 80.6 bits (88), Expect = 1e-13
Identities = 78/102 (76%), Gaps = 10/102 (10%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| |||||| ||||||||||||| ||| |||||||||
Sbjct 21621516 GGAAAAGAAACTAACTAGGATTTCCTCAGTAACGGCAAGT----------GAGCCCAGCA 21621467
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
| |||||||| ||||| || | || |||| ||||||| ||
Sbjct 21621466 CTGAATCCCCACCCCGTGGCAGAGCATGGGAAATGTGGCCTA 21621425
>seq29
Length=23005217
Score = 71.6 bits (78), Expect = 6e-11
Identities = 70/88 (80%), Gaps = 2/88 (2%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||| |||| ||||||||||||| |||| | ||||||||||| ||| |||| |
Sbjct 20107202 GGAAAAGAATCTAATCAGGATTCCCTCAATAACCTCAAGTGAACAGGG-CGAGGCCAGTG 20107144
Query 61 CCGAATCCCCGCCCCGC-GGTGGGGCGC 87
|| || | | ||||| | ||| ||| ||
Sbjct 20107143 CCAAAACACTGCCCCACAGGTAGGGGGC 20107116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230386342320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |