Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= AAMG01000530.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq16176 84.2 2e-14 seq20461 82.4 8e-14 seq17534 82.4 8e-14 seq27140 78.8 1e-12 seq11751 78.8 1e-12 seq27031 77.0 3e-12 seq24446 73.4 4e-11 seq18375 73.4 4e-11 seq16748 73.4 4e-11 seq10209 73.4 4e-11 >seq16176 Length=4694569 Score = 84.2 bits (92), Expect = 2e-14 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 9 CCCGTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCA 68 || ||||||| |||||||||||| | ||||||||| |||||||||||||||| ||| || Sbjct 1370904 CCTGTGATATTGTTCCTAATATCCAGGTGGGGAGATGATGATATTACTCCCAGTATTGCG 1370963 Query 69 CAAATTGTAAAACCCTTTCGATATATTTCCTACAATCCA 107 | |||| | ||| | ||||| |||||| ||||| Sbjct 1370964 GTAGGTGTACACCCCCTGTGATATTGTTCCTAGTATCCA 1371002 Score = 75.2 bits (82), Expect = 1e-11 Identities = 76/99 (77%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 9 CCCGTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCA 68 || ||||||| ||||||| |||| | ||||||||| |||||||||||||||| ||| | Sbjct 1370978 CCTGTGATATTGTTCCTAGTATCCAGGTGGGGAGATGATGATATTACTCCCAGTATTGTG 1371037 Query 69 CAAATTGTAAAACCCTTTCGATATATTTCCTACAATCCA 107 | |||| | ||| | ||||| |||||| ||||| Sbjct 1371038 GTAGGTGTACACCCCCTGTGATATTGTTCCTAATATCCA 1371076 Score = 73.4 bits (80), Expect = 4e-11 Identities = 52/60 (87%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 9 CCCGTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCA 68 || ||||||| |||||||||||| | | | |||||||||||||||||||||| ||| ||| Sbjct 1371052 CCTGTGATATTGTTCCTAATATCCAGGGGAGGAGAGGATGATATTACTCCCAGTATCGCA 1371111 >seq20461 Length=4912966 Score = 82.4 bits (90), Expect = 8e-14 Identities = 80/102 (78%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 8 TCCCGTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGC 67 ||| ||||||| ||||||||||||| || ||||||||||||||||||||||||| || Sbjct 2897915 TCCTGTGATATTATTCCTAATATCTAGAGGGTGAGAGGATGATATTACTCCCAATATCGC 2897856 Query 68 ACAAATTGTAAAACCCT--TTCGATATATTTCCTACAATCCA 107 | || |||| | | || | ||||| |||||| ||||| Sbjct 2897855 AGGAAATGTACACCACTTCTGTGATATTGTTCCTAATATCCA 2897814 Score = 77.0 bits (84), Expect = 3e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 12 GTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCA 68 |||||||||||||||||||| | ||||||||||||||||||||| |||||| ||| Sbjct 2897987 GTGATATAGTTCCTAATATCCTTGGGGGGAGAGGATGATATTACTCACAATATCGCA 2897931 >seq17534 Length=33210471 Score = 82.4 bits (90), Expect = 8e-14 Identities = 53/57 (93%), Gaps = 1/57 (2%) Strand=Plus/Minus Query 12 GTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCA 68 ||||||| ||||||| |||| ||||| |||||||||||||||||||||||||||||| Sbjct 9679428 GTGATATTGTTCCTA-TATCCAAGTGAGGAGAGGATGATATTACTCCCAATATGGCA 9679373 >seq27140 Length=3068644 Score = 78.8 bits (86), Expect = 1e-12 Identities = 61/70 (87%), Gaps = 2/70 (3%) Strand=Plus/Plus Query 9 CCCGTGATATAGTTCCTAATATCTAAGTG-GGGAGAGGATGATATTACTCCCAATATGGC 67 |||||||||| |||||||||| || ||| |||| |||||||||||||||||||||| || Sbjct 1514810 CCCGTGATATTATTCCTAATATTTA-GTGAGGGAAAGGATGATATTACTCCCAATATTGC 1514868 Query 68 ACAAATTGTA 77 |||| |||| Sbjct 1514869 ACAAGGTGTA 1514878 Score = 75.2 bits (82), Expect = 1e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 12 GTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCACAA 71 ||||||| |||||||||||| || || ||||||||||||||||||||||||| || Sbjct 1511820 GTGATATTGTTCCTAATATCCAAAGGGAGAGAGGATGATATTACTCCCAATATCACAGGC 1511879 Query 72 ATTGTA 77 |||||| Sbjct 1511880 ATTGTA 1511885 Score = 75.2 bits (82), Expect = 1e-11 Identities = 49/54 (91%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 11 CGTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATAT 64 |||||||| ||| |||||||| || |||||||||||||||||||||||||||| Sbjct 1512120 CGTGATATTGTTTCTAATATCCAATGGGGGAGAGGATGATATTACTCCCAATAT 1512173 Score = 73.4 bits (80), Expect = 4e-11 Identities = 75/97 (77%), Gaps = 1/97 (1%) Strand=Plus/Plus Query 12 GTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCACAA 71 ||||| | ||||||||||||||| ||||||||||||||||||| |||||| ||| Sbjct 1511745 GTGATTTGTTTCCTAATATCTAAGGATGGAGAGGATGATATTACTCTCAATATTGCATGG 1511804 Query 72 ATTGTAAAACCCT-TTCGATATATTTCCTACAATCCA 107 |||| | |||| | ||||| |||||| ||||| Sbjct 1511805 GGTGTACACCCCTCTGTGATATTGTTCCTAATATCCA 1511841 Score = 73.4 bits (80), Expect = 4e-11 Identities = 54/62 (87%), Gaps = 2/62 (3%) Strand=Plus/Plus Query 10 CCGTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCAC 69 ||||||||| |||||||||||| || |||||||||||| ||||| ||||||||| ||| Sbjct 1512273 CCGTGATATTGTTCCTAATATCCAACTGGGGAGAGGATAATATTGATCCCAATAT--CAC 1512330 Query 70 AA 71 || Sbjct 1512331 AA 1512332 >seq11751 Length=3107786 Score = 78.8 bits (86), Expect = 1e-12 Identities = 80/102 (78%), Gaps = 3/102 (3%) Strand=Plus/Minus Query 9 CCCGTGATATAGTTCCTAATATCTAAGT--GGGGAGAGGATGATATTACTCCCAATATGG 66 || ||||||| |||||||||||| | | |||||||||||| ||||||||||||| | | Sbjct 120786 CCTGTGATATTGTTCCTAATATCCAGGGTGGGGGAGAGGATGCTATTACTCCCAATGTCG 120727 Query 67 CACAAATTGTAAAACCCT-TTCGATATATTTCCTACAATCCA 107 || | |||| |||||| | ||||| |||||| ||||| Sbjct 120726 CAGGGAATGTATAACCCTCTGTGATATTGTTCCTAATATCCA 120685 Score = 75.2 bits (82), Expect = 1e-11 Identities = 79/102 (77%), Gaps = 3/102 (3%) Strand=Plus/Minus Query 9 CCCGTGATATAGTTCCTAATATCTAAGT--GGGGAGAGGATGATATTACTCCCAATATGG 66 || ||||||| |||||||||||| | | |||||||||||| ||||||||||||| | | Sbjct 121269 CCTGTGATATTGTTCCTAATATCCAGGGTGGGGGAGAGGATGCTATTACTCCCAATGTCG 121210 Query 67 CACAAATTGTAAAACCCT-TTCGATATATTTCCTACAATCCA 107 | | |||| |||||| | ||||| |||||| ||||| Sbjct 121209 GAGGGAATGTATAACCCTCTGTGATATTGTTCCTAATATCCA 121168 Score = 73.4 bits (80), Expect = 4e-11 Identities = 69/87 (79%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 21 TTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCACAAATTGTA-AA 79 || |||||||| ||||||||||||||||||| |||||||||||| ||| | |||| | Sbjct 122012 TTTCTAATATCCAAGTGGGGAGAGGATGATAGTACTCCCAATATCGCAGGGAGTGTACAC 121953 Query 80 ACCCTTTCGATATATTTCCTACAATCC 106 ||| | |||| ||||||| |||| Sbjct 121952 CCCCCTGTAATATTTTTCCTAATATCC 121926 >seq27031 Length=1831 Score = 77.0 bits (84), Expect = 3e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 12 GTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCA 68 |||||||||||||||||||| | ||||||||||||||||||||| |||||| ||| Sbjct 72 GTGATATAGTTCCTAATATCCTTGGGGGGAGAGGATGATATTACTCACAATATCGCA 16 >seq24446 Length=4485989 Score = 73.4 bits (80), Expect = 4e-11 Identities = 52/60 (87%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 9 CCCGTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCA 68 || ||||||| ||||||||||| || | ||||| ||||||||||||| |||||||| ||| Sbjct 51236 CCTGTGATATTGTTCCTAATATTTATGGGGGGAAAGGATGATATTACGCCCAATATTGCA 51177 Score = 73.4 bits (80), Expect = 4e-11 Identities = 60/71 (85%), Gaps = 3/71 (4%) Strand=Plus/Minus Query 9 CCCGTGATATAGT--TCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGG 66 |||||| ||||| |||||||||| || |||||||||||||||||||||||||||| | Sbjct 53829 CCCGTGTCATAGTGTTCCTAATATCCAAA-GGGGAGAGGATGATATTACTCCCAATATTG 53771 Query 67 CACAAATTGTA 77 || || |||| Sbjct 53770 CAGGAAGTGTA 53760 >seq18375 Length=20919 Score = 73.4 bits (80), Expect = 4e-11 Identities = 69/87 (79%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 21 TTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCACAAATTGTA-AA 79 || |||||||| ||||||||||||||||||| |||||||||||| ||| | |||| | Sbjct 12163 TTTCTAATATCCAAGTGGGGAGAGGATGATAGTACTCCCAATATCGCAGGGAGTGTACAC 12222 Query 80 ACCCTTTCGATATATTTCCTACAATCC 106 ||| | |||| ||||||| |||| Sbjct 12223 CCCCCTGTAATATTTTTCCTAATATCC 12249 >seq16748 Length=3725769 Score = 73.4 bits (80), Expect = 4e-11 Identities = 75/97 (77%), Gaps = 1/97 (1%) Strand=Plus/Plus Query 12 GTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCACAA 71 ||||||| |||||| ||||| | | ||||||||||| | ||||| ||||||| | | || Sbjct 3140553 GTGATATTGTTCCTGATATCCAGGGTGGGAGAGGATGCTGTTACTTCCAATATTGAAGAA 3140612 Query 72 ATTGTAAAAC-CCTTTCGATATATTTCCTACAATCCA 107 | |||| | | |||| ||||| |||||| ||||| Sbjct 3140613 AGTGTATACCACCTTGTGATATTGTTCCTAATATCCA 3140649 >seq10209 Length=12198231 Score = 73.4 bits (80), Expect = 4e-11 Identities = 55/65 (85%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 13 TGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCACAAA 72 |||||| |||||||||||| | || ||| |||||||||||||||||||||| ||| || Sbjct 775271 TGATATTGTTCCTAATATCCAGGTAGGGGCAGGATGATATTACTCCCAATATTGCAGGAA 775330 Query 73 TTGTA 77 |||| Sbjct 775331 GTGTA 775335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511856546880