Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq19955 96.9 2e-18 seq22563 91.5 7e-17 seq21583 77.0 1e-12 >seq19955 Length=42888418 Score = 96.9 bits (106), Expect = 2e-18 Identities = 82/100 (82%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 |||||||||||||||||| || |||||||| || |||||||| |||| | ||||| || Sbjct 31367309 AAAAGAAACTAACCAGGACTCTGTCAGTAACAGCAAGTGAACA-GGAAAAACCCAGTGCT 31367251 Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||| ||||| | |||| | || ||| ||||||| || Sbjct 31367250 GAATCCCTGCCCCACAGTGGAGTGCAGGAAATGTGGCATA 31367211 >seq22563 Length=3251119 Score = 91.5 bits (100), Expect = 7e-17 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 || |||||||||| |||||||||||||||||| |||| |||||||| |||||||||||| Sbjct 182441 GGGAAAGAAACTATCCAGGATTCCCTCAGTAATGGCGGGTGAACAGAGAAGAGCCCAGCA 182382 Query 61 CCGAATCCCCGCC 73 | |||||| ||| Sbjct 182381 TCAAATCCCTGCC 182369 >seq21583 Length=964045 Score = 77.0 bits (84), Expect = 1e-12 Identities = 81/104 (78%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 1 GGAAAAGAAACT-AACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| ||| ||||||||||||||||| || |||||| | |||| ||||||| Sbjct 890682 GGAGAAGAAACTGAACAAGGATTCCCTCAGTAACAGCAAGTGAATATGGAACAGCCCAGT 890623 Query 60 GCCGAATCCCCGCCCCGCGGTGG-GGCGCGGGACATGTGGCGTA 102 || ||| | | ||| | |||| || | ||| ||||||| || Sbjct 890622 GCTGAACCTTTGACCCACAGTGGAGGTGGTGGAAATGTGGCATA 890579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230337528480