Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aotus_20nancymaae_20[refseq_20GCF_5F000952055.2_202017-06-09] 28,922 sequences; 2,861,684,817 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq26398 87.8 2e-15 seq15008 80.6 3e-13 >seq26398 Length=5963231 Score = 87.8 bits (96), Expect = 2e-15 Identities = 81/101 (80%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69 ||||||||||||||||||||| |||||||||||||| || | |||| | | Sbjct 4357212 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 4357271 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||||||| ||||||||| ||||||||||||||| ||||| Sbjct 4357272 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT 4357311 >seq15008 Length=476845 Score = 80.6 bits (88), Expect = 3e-13 Identities = 126/176 (72%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC---GAATACATTACCAT 69 |||||||| ||||| |||| | ||||||||||||| | || | |||| | | Sbjct 426954 TTTACTTTAAAAAAGTTAGTG--TTCAAAGCAGGCCCTAGCCGCCTGGATACCGCAGCTA 427011 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 |||||||| ||||||||| ||||||||||||||| ||||| | ||| | | |||| Sbjct 427012 GGAATAATGGAATAGGACC-GCGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATGA 427069 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 | || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 427070 TTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 427125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511856546880