Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callithrix_20jacchus_20[refseq_20GCF_5F000004665.1_202010-01-22] 14,205 sequences; 2,914,958,544 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq9942 152 2e-35 seq1556 143 1e-32 seq307 91.5 7e-17 seq2320 87.8 8e-16 >seq9942 Length=15167 Score = 152 bits (168), Expect = 2e-35 Identities = 95/102 (93%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14486 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 14545 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 || ||||||||||| |||||||||||||| ||| ||||| Sbjct 14546 CCAAATCCCCGCCCTTGGGTGGGGCGCGGGAAATGCAGCGTA 14587 >seq1556 Length=121768101 Score = 143 bits (158), Expect = 1e-32 Identities = 93/102 (91%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 98519715 GGAAAAGAAGCTAACCAGGATTCCCTCAGTAATGGCGAGTGAACAGGGAAGAGCCCAGCA 98519656 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 | ||||||| ||||| |||||||| | |||| |||||||||| Sbjct 98519655 CGGAATCCCTGCCCCTCGGTGGGGTGTGGGAAATGTGGCGTA 98519614 >seq307 Length=23634 Score = 91.5 bits (100), Expect = 7e-17 Identities = 81/100 (81%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 |||||||||||||||||| ||| |||||||| || |||||||| |||| | |||| || Sbjct 21388 AAAAGAAACTAACCAGGACTCCATCAGTAACAGCAAGTGAACA-GGAAAAACCCAATGCT 21330 Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||| ||| ||||| | |||| | || ||| ||||||| || Sbjct 21329 GAAGCCCTGCCCCACAGTGGAGTGCAGGAAATGTGGCATA 21290 >seq2320 Length=142054208 Score = 87.8 bits (96), Expect = 8e-16 Identities = 71/85 (84%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 1 GGAAAAGAAACT-AACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| ||| ||||||||||||||||| || |||||| | |||||||||||| Sbjct 46838455 GGAGAAGAAACTGAACAAGGATTCCCTCAGTAACAGCAAGTGAATATGGAAGAGCCCAGT 46838396 Query 60 GCCGAATCCCCGCCCCGCGGTGGGG 84 || ||| | | | ||| |||||||| Sbjct 46838395 GCTGAACCTCTGGCCCACGGTGGGG 46838371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230369317200