Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callithrix_20jacchus_20[refseq_20GCF_5F000004665.1_202010-01-22] 14,205 sequences; 2,914,958,544 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1195 82.4 9e-14 seq1644 75.2 1e-11 >seq1195 Length=124281992 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/101 (80%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 25930117 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCAGTATCCAGGCG 25930059 Query 70 --TAAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | | ||||||||||||||||||||||| |||| ||||| Sbjct 25930058 GCTCGGTCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 25930018 >seq1644 Length=117903854 Score = 75.2 bits (82), Expect = 1e-11 Identities = 79/101 (78%), Gaps = 5/101 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||||||||| ||| ||||||||| ||||||||| ||| |||| | |||| Sbjct 81801007 AAACCAACAAAATAAAACCGCG-GTCCTATTCCATTATTCCAAGCTGCGGTATCCAGGCG 81800949 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| | || ||||| Sbjct 81800948 GCTCGGGCCTGCTTTGAACACTCTAATTTT-TTAAAGTAAA 81800909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595118093970