Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Callithrix_20jacchus_20[refseq_20GCF_5F000004665.1_202010-01-22] 14,205 sequences; 2,914,958,544 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1644 89.7 5e-16 seq1195 87.8 2e-15 >seq1644 Length=117903854 Score = 89.7 bits (98), Expect = 5e-16 Identities = 128/176 (73%), Gaps = 6/176 (3%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69 |||||||| |||||||||||| |||||||||||||| || | |||| | | | Sbjct 81800909 TTTACTTT-AAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTT 81800967 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 |||||||| ||||||||| |||||| |||||||| ||||| | ||| | | |||| Sbjct 81800968 GGAATAATGGAATAGGAC-CGCGGTTTTATTTTGTTGGTTT-TCGGAACTGAGGCCATGA 81801025 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 | || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 81801026 TTAAGAGGGACGGCCGGGGGCATTCGTATTGCCCCGCTAGAGGTGAAATTCTTGGA 81801081 >seq1195 Length=124281992 Score = 87.8 bits (96), Expect = 2e-15 Identities = 127/176 (72%), Gaps = 5/176 (3%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69 ||||||||||||||||||||| |||||||||||| | || | |||| | | Sbjct 25930018 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGACCGAGCCGCCTGGATACTGCAGCTA 25930077 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 |||||||| ||||||||| ||||||||||||||| ||||| | ||| | | || | Sbjct 25930078 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATCA 25930135 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 | || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 25930136 TTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 25930191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511929543200