Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carlito_20syrichta_20[refseq_20GCF_5F000164805.1_202013-09-18] 337,189 sequences; 3,453,864,774 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq323958 149 3e-33 seq327924 145 3e-32 seq160340 125 3e-26 seq309836 120 1e-24 seq173032 118 4e-24 seq331166 98.7 4e-18 seq323925 98.7 4e-18 seq313901 95.1 5e-17 >seq323958 Length=544 Score = 149 bits (164), Expect = 3e-33 Identities = 105/120 (88%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct 56 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 115 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| || |||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 116 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 175 >seq327924 Length=540 Score = 145 bits (160), Expect = 3e-32 Identities = 104/120 (87%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||| Sbjct 31 TGTTAGGACCCGAAAGAAGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 90 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| || |||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 91 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 150 >seq160340 Length=553 Score = 125 bits (138), Expect = 3e-26 Identities = 90/104 (87%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCG 639 ||||||||||||||||| |||| |||||||||||||||||||||||||| || |||| Sbjct 1 ATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCGTAGCG 60 Query 640 GTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 61 GTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 104 >seq309836 Length=316219 Score = 120 bits (132), Expect = 1e-24 Identities = 135/180 (75%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGAT--TTGAGTAAGAGCATAGC 563 |||||||| ||| | || |||||| ||| || || | ||| | ||||| | Sbjct 222840 GAGGGTGCGCCACTGGCCCATCCTGCCCTCTGCGCCGGGGAGGTGGAGAATGAGCACACA 222781 Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| ||||| ||||||||||||||||| |||| |||| |||||||||||||| |||| Sbjct 222780 TGTTAGGACCTGAAAGATGGTGAACTATCCCTGGGCAGGGAGAAGCCAGAGGAAATTCTG 222721 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| | | ||||||| |||||||| | || || || |||||||||||| || Sbjct 222720 GTGGAGGTCCATTGTGGTTCTGATGTGCAAATTGGTCATCCAACCTGGGTATAGGGGTGA 222661 Score = 104 bits (114), Expect = 1e-19 Identities = 110/144 (76%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC-TTCTAAAGCTAAA 98 |||| | |||| |||||||||||| | || |||| |||||| | | || ||| |||||| Sbjct 223748 GAGTTGGGTTGCCTGGGAATGCAGCCCAAAGTGGGTGGTAAACTCCATTTTAAGGCTAAA 223689 Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || |||| |||||||||||| |||||| | | ||||| ||||||| |||||| | Sbjct 223688 TACTGGCACGAGACCGATAGCCAGCAAGTACCATAAGGGAAAGTTGAAAAGAACTTTGAA 223629 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||| Sbjct 223628 GAGAGAGTTCAAGAGGGTGTGAAA 223605 >seq173032 Length=335 Score = 118 bits (130), Expect = 4e-24 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 184 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 243 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| |||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 244 ACCGGCACGAGACCGATAGCTAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 303 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 | |||||| || || ||||||| Sbjct 304 ATAGAGTTCAAGAGGGCGTGAAA 326 >seq331166 Length=481 Score = 98.7 bits (108), Expect = 4e-18 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659 |||| |||||||||||||||||||||||||| || |||||| ||| |||||||||| | Sbjct 478 AGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCCGT 419 Query 660 CGTCAAATTTGGGTATAGGGGCGA 683 |||| | ||||||||||||||| Sbjct 418 CGTCCGACCTGGGTATAGGGGCGA 395 >seq323925 Length=643 Score = 98.7 bits (108), Expect = 4e-18 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 605 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCA 664 |||||||||||||||||||||||||| || |||||| ||| ||||||||||| ||||| Sbjct 643 GAAGCCAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCC 584 Query 665 AATTTGGGTATAGGGGCGA 683 | ||||||||||||||| Sbjct 583 GACCTGGGTATAGGGGCGA 565 >seq313901 Length=677788 Score = 95.1 bits (104), Expect = 5e-17 Identities = 116/157 (74%), Gaps = 5/157 (3%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||||||||||||| | || ||| | |||| | | ||||| ||||||| Sbjct 31255 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGATAAACTCCATCTAAGGCTAAAT 31314 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | |||| ||||| |||||| |||||| | ||||| ||||||| |||||| | Sbjct 31315 ACTGGCACGAGACTGATAGC---CAAGTACCACAAGGGAAAGTTGAAAAGAACTTTG--A 31369 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 ||||||| || || ||||| | ||| | ||| || Sbjct 31370 AGAGAGTACAAGAGGCCGTGACACCGTTCAGAGGTAA 31406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2072767295950