Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carlito_20syrichta_20[refseq_20GCF_5F000164805.1_202013-09-18] 337,189 sequences; 3,453,864,774 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq321694 356 4e-96 seq161239 351 2e-94 seq150135 351 2e-94 seq330936 347 2e-93 seq176411 322 8e-86 seq148710 288 2e-75 seq289446 286 6e-75 seq309836 275 1e-71 seq305658 156 7e-36 seq135715 149 1e-33 seq302428 132 8e-29 seq309643 120 5e-25 >seq321694 Length=565 Score = 356 bits (394), Expect = 4e-96 Identities = 256/294 (87%), Gaps = 1/294 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||||| | |||| ||||||||||||||||||||||||||||| Sbjct 48 TACTGAGCAGGATTACCATGGCAACGACACATCATCAGTAGGGTAAAACTAACCTGTCTC 107 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 108 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 167 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 168 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 227 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 228 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 287 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | || | |||||||| ||||| | |||||| ||| ||||||| Sbjct 288 TAAAACCCCAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 341 >seq161239 Length=455 Score = 351 bits (388), Expect = 2e-94 Identities = 255/294 (87%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||||| | |||| ||||||||||||||||||||||||||||| Sbjct 452 TACTGAGCAGGATTACCATGGCAACGACACATCATCAGTAGGGTAAAACTAACCTGTCTC 393 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct 392 ACGACGGTCTAAACCCAGCTCACGTTCCTTATTAGTGGGTGAACAATCCAACGCTTGGTG 333 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 332 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 273 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 272 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 213 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | || | |||||||| ||||| | |||||| ||| ||||||| Sbjct 212 TAAAACCCCAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 159 >seq150135 Length=675 Score = 351 bits (388), Expect = 2e-94 Identities = 255/294 (87%), Gaps = 1/294 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||||| | |||| ||||||||||||||||||||||||||||| Sbjct 175 TACTGAGCAGGATTACCATGGCAACGACACATCATCAGTAGGGTAAAACTAACCTGTCTC 234 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 235 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 294 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 295 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 354 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||| ||||||||||||||||||||||||||| |||||| || Sbjct 355 TGAACGCTTGGCCGCCACAATCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 414 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | || | |||||||| ||||| | |||||| ||| ||||||| Sbjct 415 TAAAACCCCAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 468 >seq330936 Length=447 Score = 347 bits (384), Expect = 2e-93 Identities = 251/289 (87%), Gaps = 1/289 (0%) Strand=Plus/Plus Query 6 AGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTCATGAC 64 ||| | |||||||| | |||| |||||||||||||||||||||||||||||| ||| Sbjct 2 AGCAGGATTACCATGGCAACGACACATCATCAGTAGGGTAAAACTAACCTGTCTCACGAC 61 Query 65 GGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTC 124 |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct 62 GGTCTAAACCCAGCTCTCGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTGAATTC 121 Query 125 TGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAAC 184 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 122 TGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAAC 181 Query 185 GCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 244 ||||||| ||||||||||||||||||||||||||||||||||| |||||| || | ||| Sbjct 182 GCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCTTAAAA 241 Query 245 TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | | || | |||||||| ||||| | |||||| ||| ||||||| Sbjct 242 CCCCAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 290 >seq176411 Length=392 Score = 322 bits (356), Expect = 8e-86 Identities = 236/273 (86%), Gaps = 1/273 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||||| | |||| ||||||||||||||||||||||| ||||| Sbjct 276 TACTGAGCAGGATTACCATGGCAACGACACATCATCAGTAGGGTAAAACTAACCCGTCTC 217 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 216 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATGCAACGCTTGGTG 157 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 156 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGAAGTCGCTA 97 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 96 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 37 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272 | ||| | | || | |||||||| ||||| Sbjct 36 TAAAACCCCAAAGGTCAGAAGGATCGTGAGGCC 4 >seq148710 Length=421 Score = 288 bits (318), Expect = 2e-75 Identities = 201/229 (88%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 65 GGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTC 124 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 421 GGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTGAATTC 362 Query 125 TGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAAC 184 |||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 361 TGCTTCACAATGATAGGAAGCGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAAC 302 Query 185 GCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 244 ||||||| ||||||||||||||||||||||||||||||||||| |||||| || | ||| Sbjct 301 GCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCTTAAAA 242 Query 245 TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | | || | |||||||| ||||| | |||||| ||| ||||||| Sbjct 241 CCCCAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 193 >seq289446 Length=460352 Score = 286 bits (316), Expect = 6e-75 Identities = 244/298 (82%), Gaps = 5/298 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||||| | | || ||||||||||||||||||||||||||||| Sbjct 264901 TACTGAGCAGGATTACCATGGTAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 264960 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 ||| |||||||||| ||||||| || |||||||||||| ||||||||||||||||| | Sbjct 264961 ATGGCGGTCTAAACTCAGCTCATGTCCCCTATTAGTGGATGAACAATCCAACGCTTGGTG 265020 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||| |||||||||||||||||| |||| ||| Sbjct 265021 AATTCTGCTTCACAATGATAGGAAGAGCCGACGTCGAAGGATCAAAAAGCATCGTCACTA 265080 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTT---ATCCCTGTGGTAACTTTTCTGGCACCTCTA 236 ||| ||||| |||||||||||||||| |||||||| |||||||| ||| |||||| Sbjct 265081 -GAATGCTTGACTGCCACAAGCCAGTTAACATCCCTGTCGTAACTTTCCTGACACCTCCT 265139 Query 237 GCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 || | |||| | | || | ||||||| | ||| | ||| ||||| |||||||| Sbjct 265140 GCTTAAAATCCCAAAGGTCAAAAGGATTGCGAGGACCGGATTTTATGGTCTGTATTCA 265197 >seq309836 Length=316219 Score = 275 bits (304), Expect = 1e-71 Identities = 205/237 (86%), Gaps = 6/237 (3%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | || ||||| ||| || |||||||||| ||||||||||||||||| Sbjct 220499 TACTGAGCAGGATCACCAT---GGCAACACATCATCAGTAGCGTAAAACTAACCTGTCTT 220555 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||| |||||| |||||||||||||||||||||||||||||||| | Sbjct 220556 ACGACGGTCTAAACCCTGCTCACATTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 220615 Query 120 AATTCTGCTTCGGTATGATA--GGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 ||||||||||| |||| | |||||||||||||| ||||||||||||||| | ||| | Sbjct 220616 AATTCTGCTTCACAATGACAGGGGAAGAGCCGACATTGAAGGATCAAAAAGCGATGTCAC 220675 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct 220676 TATGAACGCTTGGCCACCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTC 220732 >seq305658 Length=712767 Score = 156 bits (172), Expect = 7e-36 Identities = 124/149 (83%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 85 TCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAG 144 ||||||||||||| |||||| ||||| ||| | |||||||| ||| ||||||||||| Sbjct 168582 TCCCTATTAGTGGATGAACAGCCCAACCCTTGCTGAATTCTGTTTCACAATGATAGGAAG 168641 Query 145 AGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAG 204 |||| ||||| ||| |||||||||||| |||||| || || |||| | | |||| ||| Sbjct 168642 AGCCAACATCCAAGTATCAAAAAGCAAAGTCGCTCTGGACACTTGACCACTGCAAGTCAG 168701 Query 205 TTATCCCTGTGGTAACTTTTCTGGCACCT 233 ||||||||||||| ||||||||| ||||| Sbjct 168702 TTATCCCTGTGGTCACTTTTCTGACACCT 168730 >seq135715 Length=216688 Score = 149 bits (164), Expect = 1e-33 Identities = 140/176 (80%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACT---AACCT---GTCTCATGACGGTCTAAACCCAGCTCACGTT 85 ||||||||||||||| | |||| |||| | | ||||||| ||| ||||| ||| Sbjct 107679 CATCAGTAGGGTAAAGCCTAAAACCAATGGTCTTACAA-GGTCTAATCCCTGCTCAGGTT 107737 Query 86 CCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGA 145 |||||| ||||||||||||| ||||| | | |||||||||||| | |||||||||| Sbjct 107738 CCCTATCAGTGGGTGAACAACCCAACACCTGGTGAATTCTGCTTCACAAGGATAGGAAGA 107797 Query 146 GCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGC 201 | |||||| |||||||||||||||| ||| | | |||| |||||||||||| ||| Sbjct 107798 GGCGACATTGAAGGATCAAAAAGCAGTGTCTCCAGGAACACTTGGCTGCCACTAGC 107853 >seq302428 Length=215490 Score = 132 bits (146), Expect = 8e-29 Identities = 158/215 (73%), Gaps = 16/215 (7%) Strand=Plus/Plus Query 89 TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148 |||||||||||||||||||||| |||| ||||||||| || |||| |||| ||| | Sbjct 120149 TATTAGTGGGTGAACAATCCAATGCTTGGTGAATTCTGCCTCACAATGACAGGA-GAGAC 120207 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGA-----------ACGCTTGGCTGCCAC 197 ||||| ||| |||||||| || |||| |||| | ||||||| ||||| Sbjct 120208 GACATGGAA----CAAAAAGCGACATCGCCATGATGTCACTATCAATGCTTGGCCGCCAC 120263 Query 198 AAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTA 257 ||||||||||| ||||||||||||||| |||||||| || | ||| | || | Sbjct 120264 AAGCCAGTTATTCCTGTGGTAACTTTTATGGCACCTTCCGCTTAAAAACCCAGAGGCCAG 120323 Query 258 AAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 ||||||| ||||| |||||| || |||||| Sbjct 120324 AAGGATCACTAGGCTCTGCTTTCACAGTCTGTATT 120358 >seq309643 Length=654770 Score = 120 bits (132), Expect = 5e-25 Identities = 134/177 (76%), Gaps = 3/177 (2%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||| |||||||| ||| ||||||| ||| ||| || ||||||||||||||| Sbjct 102057 TCATCAGTAAGGTAAAACAAACGTGTCTCACAGTGGTGTAATCC-AGCTCACGTTCCCTA 101999 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| |||| | ||| || | |||||||||| | |||||||||||||| | Sbjct 101998 TTAGAAAATGAAATCTTGAAC--TTGCTGAATTCTGCTCCACAATGATAGGAAGAGCTAA 101941 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207 || |||||||| || | || ||||||| |||||||| |||||||| ||||| Sbjct 101940 TATTAAAGGATCAGGAAATGATTTCACTATGAATGCTTGGCTACCACAAGCTAGTTA 101884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 851519057184