Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carlito_20syrichta_20[refseq_20GCF_5F000164805.1_202013-09-18] 337,189 sequences; 3,453,864,774 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq301619 223 3e-53 seq316284 111 1e-19 seq96983 95.1 1e-14 >seq301619 Length=432943 Score = 223 bits (246), Expect = 3e-53 Identities = 609/917 (66%), Gaps = 23/917 (3%) Strand=Plus/Minus Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084 ||| ||| || || ||| || ||||| || || || | || || |||||||| | | Sbjct 189306 ATGGACCTCTGCTGAGAGAAAACCCTCGCCGCTTTGTCATCTTTCCTATCGAGTACCATG 189247 Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATT 61144 | || |||| ||||||| || || || || ||||| ||||| | || ||||| ||| Sbjct 189246 ACATCTGGCAGATGTACACGAAAGCTGAGGCCTCCTTTTGGACAGCTGAAGAGGTTGATC 189187 Query 61145 TGTCCAAAGACATGAATGACTGGGAG--CGTTTATCGAGCGGTGAACAACATTTCATTAA 61202 | |||||||| | ||||||| | | | | | || || | |||| || Sbjct 189186 TTACCAAAGACCTCCGGCACTGGGAATCCCTGAAACCTGTGGAGAG--ATATTTTATATC 189129 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 | ||| || | |||||||| || || || || || ||||| || || |||| || Sbjct 189128 GCGTGTTCTGACTTTCTTTGCAGCAAGAGATGGCATAGTAAATGAAAACTTGGTGGAGCG 189069 Query 61263 -TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| || || || || ||||| | || || || |||||||| |||||||| ||||||| Sbjct 189068 ATTTAGC-CAAGAAGTTCAAGTTACAGAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCA 189010 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 |||| || | || || || ||||||||| | || || || || ||||| | || | Sbjct 189009 TGGAAAACATACATTCTGAAATGTACAGTCTCCTTATTGACACTTACATTAAAGACCCCA 188950 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 ||| | ||| | ||||||||||| |||||||| || || ||| ||| || | Sbjct 188949 AAGAAAGGGAATTTCTCTTCAATGCCATTGAGACGATGCCTTGTGTCAAGAAGAAGGCAG 188890 Query 61442 ATTGGGCCTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGC 61499 |||||||||| ||||| | |||| |||||| | ||| ||||| | | || Sbjct 188889 ATTGGGCCTTGCGTTGGA--CTGGGGACAAAGAGGCTACTTATGGAGAACGTGTTGTAGC 188832 Query 61500 ATTTGCGGTGGTCGAGGG--TGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 ||||| | || || || | | ||||| ||| || ||| | | || || ||| | Sbjct 188831 CTTTGCTGCAGTGGAAGGCATCTGCTTTTC--TGGTTCTTTTACATCGATATTCTGGCTC 188774 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATG-AGTTGATATCACGCGACGA 61616 |||||| | ||||| ||||| || || || || ||||| | || || || | || || Sbjct 188773 AAGAAATGAGGACTGATGCCTGGCCTCACATTTCCCAATGAACTTATTAGCA-GAGATGA 188715 Query 61617 GGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTC 61676 |||| | || ||||| ||||| || ||||||||| | ||| | | || || Sbjct 188714 GGGCTTACACTGTGACTTTGCCTGCCTGATATTCAAAC---ACCTGATACACAAACCATC 188658 Query 61677 GGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736 |||| || | || || || | | || || | || |||||||| || || || Sbjct 188657 GGAGCAGAGAGTAAAAGAAATAATCATCAATGCAGTTAGGATAGAACAGGAGTTCCTCAC 188598 Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796 || || ||||| || ||||| || |||||||| ||||| ||| || || || Sbjct 188597 AGAAGCCTTGCCTGTGAAGCTCATTGGGATGAATTGCATTTTAATGAAGCAATACATCGA 188538 Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGC--GGATCTATAATACGAAA 61854 ||||| || ||| | || || | || ||||| | ||| || | | || | || Sbjct 188537 GTTTGTGGCTGACAGACTTATGCTGGAACTGGGT-TTTAGCAAGGTTTTCAAAGTAG-AA 188480 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 || |||||||| || ||||| | | ||| ||||| || | ||| || || || ||||| Sbjct 188479 AATCCATTTGACTTGATGGATAATACTTCACTGGAAGGAATGACTAACTTCTTTGAGAAG 188420 Query 61915 CGTGTAGGCGACTATCA 61931 | |||||||| ||||| Sbjct 188419 AGAGTAGGCGAATATCA 188403 >seq316284 Length=490044 Score = 111 bits (122), Expect = 1e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||||||||| | ||||| || |||||||| ||||| ||||| || | ||||| || Sbjct 81492 GGTATACTCTATGATTTCTGTACACAGATTGCTGCATTTGATGGTTCCTATGTTCTGCTG 81551 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || || || ||||| || ||||| ||||| | |||||||||||| || ||||| || Sbjct 81552 GTTGCTTTTCCGATTACAGGCATCTTTGTAGAGCATGTACGGAGTACCTGTCTCTGTCTG 81611 Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192 |||||||||||||| | |||||| Sbjct 81612 AGACTCAATGATGGCATACCAAAG 81635 >seq96983 Length=126056 Score = 95.1 bits (104), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 |||||||| || || | ||||| ||||||||||| ||||| |||||| ||| |||||| Sbjct 24434 CAGGAGGTACAGGTTCCAGAGGCTCGTTGTTTCTATGGCTTTCAGATTCTCATTGAGAAT 24493 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 || || || ||||||||||| | || || || || |||||||| || Sbjct 24494 GTTCATTCAGAGATGTACAGCTTGCTAATAGACACTTACATCAGAGA 24540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395934197906960