Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq2543 196 7e-48
seq36 75.2 2e-11
>seq2543
Length=8359
Score = 196 bits (216), Expect = 7e-48
Identities = 185/228 (81%), Gaps = 6/228 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||| ||||| |||||||| | ||||||||||||| |
Sbjct 6717 GTACAAAGGGCAGGGACGTAATCAACGTGAGCT-GATGACTCACACTTACTAGGAATT-C 6660
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| ||| || ||||||||| | ||||| |||||| | | |||||| | ||
Sbjct 6659 CTCGTTCAAGGGAAATAATTGCAATTCCCGATCCCGATCACGGAGGATTTTCAAGGGGTT 6600
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| | |||| |||| | ||| | || | || ||| | | |||||||||||||||||
Sbjct 6599 ACCAGTACCTTTCGGTAATGGTTACAG-CACGCTGATTCCTCCAGTGTAGCGCGCGTGCA 6541
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227
|||| | |||||||||||||||||||||||||||||| ||| ||||||
Sbjct 6540 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC-AACTTC 6495
>seq36
Length=10367870
Score = 75.2 bits (82), Expect = 2e-11
Identities = 127/180 (71%), Gaps = 3/180 (2%)
Strand=Plus/Plus
Query 21 GTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATT 80
|||||||| ||||| ||||| ||| ||||| ||||| | ||||| | | || ||||
Sbjct 1933414 GTCAACGCAAGCTT-ATGACCCGCATTTACTGAGAATT-CTTCGTTCATGGGGAATAATT 1933471
Query 81 GCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATTACCCGGACCTGTCGGCCAAG 139
||||| | ||||| ||||||| ||||| | ||||| | |||| |||| |
Sbjct 1933472 GCAATCCCCGATCCCTATCACGAATGGGGTTCAAGTGGTTACCTGCGCCTGCCGGCGTGG 1933531
Query 140 GTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCA 199
| | || || ||| |||||||||| ||||||| |||| | | |||||||||||
Sbjct 1933532 GGTAGGCACACGCTGAGCCAGTCAGTGTAGCCCGCGTGCAGCCCCGGATATCTAAGGGCA 1933591
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751947868540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |