Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq2543 154 3e-35
>seq2543
Length=8359
Score = 154 bits (170), Expect = 3e-35
Identities = 185/246 (75%), Gaps = 4/246 (2%)
Strand=Plus/Plus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133
||||| ||||||||||||||||| |||| || ||| ||| |||||| |||||||
Sbjct 5834 TTTACCTTGAAAAAATTAGAGTGCTCAATGCGGGCTAATGCCTGAATACTCGTGCATGGA 5893
Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193
||||| ||||||| | |||||||||||||||||||| | | | ||||| ||||
Sbjct 5894 ATAATGAAATAGGATCT-CGGTTCTATTTTGTTGGTTTTCTGATCTGAGATAATGGTTAA 5952
Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA-TTTATTG 252
||||| | |||||| | |||| || |||||||||||||||||| || |
Sbjct 5953 GAGGGACGGACGGGGGCATTCGTATCGCTGCGTGAGAGGTGAAATTCTTGGACCGTAGCG 6012
Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|||| || ||||||||||| || ||||| |||| ||||||||||| ||||||||||
Sbjct 6013 -AGACGTACGACTGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCA-AGAACGAAAGT 6070
Query 313 TAGGGG 318
|| ||
Sbjct 6071 CAGAGG 6076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915134508288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |