Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016- 04-04] 7,156 sequences; 2,717,703,182 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq745 100 1e-19 seq2543 87.8 8e-16 seq962 86.0 3e-15 seq691 82.4 4e-14 >seq745 Length=522037 Score = 100 bits (110), Expect = 1e-19 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 |||||||||||||||||||||| |||||||| || |||||||| |||| | ||||| || Sbjct 147164 AAAAGAAACTAACCAGGATTCCATCAGTAACAGCAAGTGAACA-GGAAAAACCCAGTGCT 147106 Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||| ||||| | |||| | | ||| ||||||| || Sbjct 147105 GAATCCCTGCCCCACAGTGGAGTACAGGAAATGTGGCATA 147066 >seq2543 Length=8359 Score = 87.8 bits (96), Expect = 8e-16 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||| ||| |||||||||||||||| ||| || |||||| || Sbjct 7799 GGAAAAGAAACTAACGAGGATTTCCTTAGTAACGGCGAGTGAAAAGGAAAAAGCCCAACG 7858 Query 61 CCGAATCC 68 | |||||| Sbjct 7859 CTGAATCC 7866 >seq962 Length=127210 Score = 86.0 bits (94), Expect = 3e-15 Identities = 83/104 (80%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 1 GGAAAAGAAACT-AACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| ||| ||||||||||||||||| || |||||| | |||||||||||| Sbjct 67576 GGAGAAGAAACTGAACAAGGATTCCCTCAGTAACAGCAAGTGAATATGGAAGAGCCCAGT 67517 Query 60 GCCGAATCCCCGCCCCGCGGT-GGGGCGCGGGACATGTGGCGTA 102 || ||| | | | ||| | || |||| | ||| ||||||| || Sbjct 67516 GCTGAACCTCTGACCCACAGTGGGGGTGGTGGAAATGTGGCATA 67473 >seq691 Length=684505 Score = 82.4 bits (90), Expect = 4e-14 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 4 AAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCG 63 |||||||||| |||||||||||||||||| ||| |||||||| |||||||||||| | Sbjct 615701 AAAGAAACTATCCAGGATTCCCTCAGTAATGGCCAGTGAACAAAGAAGAGCCCAGCATCA 615760 Query 64 AATCCCCGCC 73 ||||| ||| Sbjct 615761 CATCCCTGCC 615770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230384543040