Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq2543 203 6e-50
seq92 93.3 8e-17
seq36 89.7 1e-15
>seq2543
Length=8359
Score = 203 bits (224), Expect = 6e-50
Identities = 203/258 (79%), Gaps = 4/258 (2%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | ||||| |||||| ||| ||||||||||||||||
Sbjct 6462 CTTCTTAGAGGGACAAGCGGTGTTTAGCCGCATGAAGTT-GAG-CAATAACAGGTCTGTG 6519
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| ||||||||||||||||| || || || | | | |
Sbjct 6520 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGGAGGAATCAGCGTGCTG-TAA 6578
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|| | ||| ||||| ||||| | | ||| || |||| | ||||| | | ||||
Sbjct 6579 CCATTACCGAAAGGTACTGGTAACCCCTTGAAAATCCTCCGTGATCGGGATCGGGAATTG 6638
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | ||| |||||||||| ||||||||| | | ||||||||| | ||||||||
Sbjct 6639 CAATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGCTCACGTTGATT 6698
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 6699 ACGTCCCTGCCCTTTGTA 6716
>seq92
Length=6912755
Score = 93.3 bits (102), Expect = 8e-17
Identities = 147/208 (71%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 110 TGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGG-GCCGCACGCGCGCTACACT 168
||| ||||||||||||||||||||||||||| || |||| || ||| |||| ||||||
Sbjct 2075300 TGAAGCAATAACAGGTCTGTGATGCCCTTAGGGGT-CTGGAGCTGCATGCGCACTACACC 2075242
Query 169 GACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG 228
|| | | | || | | || ||| | ||| ||||| || | || | |
Sbjct 2075241 AACTGGCTCGGTGTGTGCCTACCCGATGCCAGCAGGCGCTGGTAAACTGTTGAACCCCAT 2075182
Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288
||||| ||||||| | | |||||||||||| | | | | |||| ||| | |||||| ||
Sbjct 2075181 TCGTGATGGGGATCGGGGATTGCAATTATTCCCCATGACCGAGAAATTTCCAGTAAGTGC 2075122
Query 289 GTGTCATCAGCACGCGTTGATTACGTCC 316
||||| | | || ||||||| ||||
Sbjct 2075121 TGGTCATAAACTTGCATTGATTAAGTCC 2075094
>seq36
Length=10367870
Score = 89.7 bits (98), Expect = 1e-15
Identities = 126/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191
||||||||||| | | |||| ||||||| ||||||||||| | || || || | | |
Sbjct 1933591 TGCCCTTAGATATCCGGGGCTGCACGCGGGCTACACTGACTGGCTCAGCGTGTGCCTACC 1933532
Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251
| ||||| ||| ||||| | | || | | ||||| | ||||| | | |||||
Sbjct 1933531 CCACGCCGGCAGGCGCAGGTAACCACTTGAACCCCATTCGTGATAGGGATCGGGGATTGC 1933472
Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308
||||||| | | | ||||| |||| | ||||| ||| ||||| ||| |||||||
Sbjct 1933471 AATTATTCCCCATGAACGAAGAATTCTCAGTAAATGCGGGTCATAAGCTTGCGTTGA 1933415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947132218368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |