Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cebus_20capucinus_20imitator_20[refseq_20GCF_5F001604975.1_202016-
04-04] 7,156 sequences; 2,717,703,182 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq2543 104 4e-20
seq113 95.1 2e-17
seq444 86.0 1e-14
seq56 84.2 4e-14
>seq2543
Length=8359
Score = 104 bits (114), Expect = 4e-20
Identities = 93/114 (82%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| | || | || |||| || || |
Sbjct 2482 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 2539
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 2540 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 2593
>seq113
Length=6062217
Score = 95.1 bits (104), Expect = 2e-17
Identities = 91/114 (80%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| | || | || |||| || || |
Sbjct 440519 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 440576
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| ||||||| |||||||||||||| |||||||||
Sbjct 440577 GGGGCGAAGCTACCATCTGTGGGATTATAACTGAACGCCTCTAAATCAGAATCC 440630
Score = 84.2 bits (92), Expect = 4e-14
Identities = 69/84 (82%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 31 TTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGG 90
||||| | || | || |||| || || || |||||||||||||||| ||||||||
Sbjct 4588341 TTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGA 4588400
Query 91 CTGAACGCCTCTAAGTCAGAATCC 114
||||||||||||||||||||||||
Sbjct 4588401 CTGAACGCCTCTAAGTCAGAATCC 4588424
>seq444
Length=1760635
Score = 86.0 bits (94), Expect = 1e-14
Identities = 76/94 (81%), Gaps = 1/94 (1%)
Strand=Plus/Plus
Query 21 TTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGC 80
|||||| | ||||| |||| | || |||| || || || ||||||||||||||||
Sbjct 831217 TTCAGAC-ATTTGGTGTTTGTGCTTGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGT 831275
Query 81 TGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
|||||||| | ||||||||||||||||||||||
Sbjct 831276 GGGATTATGACCGAACGCCTCTAAGTCAGAATCC 831309
>seq56
Length=8603470
Score = 84.2 bits (92), Expect = 4e-14
Identities = 69/84 (82%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 31 TTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGG 90
||||| | || | || |||| || || || |||||||||||||||| ||||||||
Sbjct 988468 TTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGA 988409
Query 91 CTGAACGCCTCTAAGTCAGAATCC 114
||||||||||||||||||||||||
Sbjct 988408 CTGAACGCCTCTAAGTCAGAATCC 988385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819143209984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |