Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq3171 156 8e-36 >seq3171 Length=2389652 Score = 156 bits (172), Expect = 8e-36 Identities = 209/285 (73%), Gaps = 7/285 (2%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| || ||| | | |||||||||||||||||||||||| Sbjct 2009727 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCAAAGCGTTTACTTTGAAAAAATTAGAGTGT 2009668 Query 98 TCAAAGCAGGCC---TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154 |||||||||||| || | |||| ||| |||||||| ||||||||| | || Sbjct 2009667 TCAAAGCAGGCCCAAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGAC-CGTGG 2009609 Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214 ||||||||||||||||| || || | | |||||||| ||||| |||||| | Sbjct 2009608 TTCTATTTTGTTGGTTTTCAGAACTGAGGCCATGATTAAGAGGGACGACCGGGGGCATTC 2009549 Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG-AAGACTAACTACTGCGAAAGC 273 ||||| | | ||||||||||| |||||| | ||||| || | | ||||| Sbjct 2009548 GTATTGCACCGCTAGAGGTGAAATACTTGGACCGGGCGCAAGACGGACCAGAGTGAAAGT 2009489 Query 274 GTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || ||||| |||||||||||||||| |||||||||| || || Sbjct 2009488 ATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGTCAGAGG 2009445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915095365184