Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq3171 167 1e-39 seq3106 105 3e-21 seq3944 102 4e-20 seq3370 98.7 5e-19 >seq3171 Length=2389652 Score = 167 bits (184), Expect = 1e-39 Identities = 98/102 (96%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2006332 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 2006273 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||| ||||||||||||||||||| |||| |||||||||| Sbjct 2006272 TCGAATACCCGCCCCGCGGTGGGGCGTGGGAAATGTGGCGTA 2006231 >seq3106 Length=1093974 Score = 105 bits (116), Expect = 3e-21 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||| Sbjct 946647 GGAAAAGAAACTAACCAGGATTCCCTCAGTAATGGCAAGTGAACAGGTAAGAGCCCAGCA 946706 Query 61 CCGAATCCCCGCC 73 || |||||| ||| Sbjct 946707 CCAAATCCCTGCC 946719 >seq3944 Length=986237 Score = 102 bits (112), Expect = 4e-20 Identities = 84/102 (82%), Gaps = 3/102 (3%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||| ||||||||||||||||||| ||||| || ||||||||| | |||||||| | Sbjct 274685 GGAAAATAAACTAACCAGGATTCCCTTAGTAAAGGGGAGTGAACA---AGGAGCCCAGTG 274629 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 || |||||| | ||| ||||||| |||||| ||| || ||| Sbjct 274628 CCAAATCCCTGTCCCTTGGTGGGGTGCGGGAAATGAGGTGTA 274587 Score = 77.0 bits (84), Expect = 1e-12 Identities = 76/98 (78%), Gaps = 3/98 (3%) Strand=Plus/Minus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 ||| | |||||||||||| ||| ||||| || |||||||||| | ||||| ||| Sbjct 125400 AAATGGAACTAACCAGGAAGACCTTAGTAAAGGTAAGTGAACAGG---CATCCCAGTGCC 125344 Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCG 100 |||||| ||||| ||||||| | |||| |||||||| Sbjct 125343 AAATCCCTGCCCCTTGGTGGGGTGAGGGAAATGTGGCG 125306 >seq3370 Length=26952557 Score = 98.7 bits (108), Expect = 5e-19 Identities = 83/102 (81%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||| ||||||||| |||||||| | || ||||||||||||||||||||| | Sbjct 3587448 GGAAAAGAAATTAACCAGGACTCCCTCAGCAGTAGCAAGTGAACAGGGAAGAGCCCAGTG 3587507 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||| ||||| | || ||| | |||| ||| ||| || Sbjct 3587508 TTGAATCCCTGCCCCACAGTAGGGTGTGGGAAATGGGGCATA 3587549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230375304720