Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cercocebus_20atys_20[refseq_20GCF_5F000955945.1_202015-03-19] 11,433 sequences; 2,848,246,356 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq3171 170 4e-40 seq2818 82.4 1e-13 >seq3171 Length=2389652 Score = 170 bits (188), Expect = 4e-40 Identities = 195/258 (76%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 2009050 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 2008993 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| |||||||| |||||||||| | || || || | | Sbjct 2008992 ATGCCCTTAGATGTCCCGGGCTGCACGCGCACTACACTGACTGGCTCAGCGTGTGCTTAC 2008933 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| || || || | | |||| | | || | | ||||| || |||| | | |||| Sbjct 2008932 CCTACGCTGGCAGATGCGTGTAACCCGTTGAACCCCATTCGTGATGAGGATCGGGGATTG 2008873 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||| || |||||| ||| ||||| ||| ||||||||| Sbjct 2008872 CAATTATTCCCTATGAGCGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGATT 2008813 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 2008812 AAGTCCCTGCCCTTTGTA 2008795 >seq2818 Length=24410408 Score = 82.4 bits (90), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 3/101 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | || || |||||||||||||||| Sbjct 8451693 CTTCTTAGAGGGACAAGTGGCATTCAGCCACCTGA-GATTCAG-CAATAACAGGTCTGTG 8451636 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171 |||||||||||||| | |||| |||| | ||||||||||| Sbjct 8451635 ATGCCCTTAGATGTCCAGGGCTACACGTGTGCTACACTGAC 8451595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947091706624