Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25] 2,004 sequences; 2,789,656,328 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq633 95.1 1e-17 >seq633 Length=51153 Score = 95.1 bits (104), Expect = 1e-17 Identities = 124/168 (74%), Gaps = 8/168 (5%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 || ||||| ||||||||| || | |||||| ||||||| ||| || || |||| Sbjct 39962 CGAAAACGAACACACGTAATCAAGGAGAATATCCTAAGGCTAACGAGCTAACTACAGTTA 39903 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141 ||||||| ||||| | || ||||||||| |||| |||| || ||| | || || | | Sbjct 39902 AGGAACTCTGCAAATTAACTCTGTAACTTAGGGAGAAAGAGTGCCTGCAATGACATTGCA 39843 Query 142 GGGCGCAG---AGAAT-AGGTCCAGGCAACTGTTTAACAAAAACACAG 185 || | ||| ||||| ||| | || |||||||||||||||||||| Sbjct 39842 GGTCACAGTAAAGAATGAGGGC--GG--ACTGTTTAACAAAAACACAG 39799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531189687416