Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25] 2,004 sequences; 2,789,656,328 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq633 159 9e-37 >seq633 Length=51153 Score = 159 bits (176), Expect = 9e-37 Identities = 187/249 (75%), Gaps = 4/249 (2%) Strand=Plus/Plus Query 33 ATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGG 92 ||||||| ||| || || ||||||| | | ||||| |||||| || || | | Sbjct 39571 ATTTCACCGAGCCTACAGTCGAGACAGTCAAGAGCTGGTTACACCATTCAAGCGGGACAG 39630 Query 93 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTAC 152 || ||||| |||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct 39631 AATTTACCTGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 39690 Query 153 CGGGGCTTCGATCAAGAGCTTCG--CGTT-AG-CTAACCCCATCAATTAACCTTCCGGCA 208 | |||||| ||| ||||| | | || || || ||| | | || |||||| |||| Sbjct 39691 CAGGGCTTAAGTCAGAAGCTTTGGACTTTCAGCCTGACCTCCTTCTTTGACCTTCTGGCA 39750 Query 209 CCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAA 268 ||||||||| ||| | | ||||| || ||| |||||| | ||||||||||| Sbjct 39751 CCGGGCAGGTGTCGCCACATATACTTCATGTTTGAATTTTGCATATAGCTGTGTTTTTGT 39810 Query 269 TAAACAGTC 277 ||||||||| Sbjct 39811 TAAACAGTC 39819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260774733568