Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25] 2,004 sequences; 2,789,656,328 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq344 98.7 5e-19 seq287 95.1 6e-18 seq84 89.7 2e-16 >seq344 Length=82825804 Score = 98.7 bits (108), Expect = 5e-19 Identities = 83/102 (81%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||| ||||||||| |||||||| | || |||||||||||||||| |||| | Sbjct 26699238 GGAAAAGAAATTAACCAGGACTCCCTCAGGAGTAGCAAGTGAACAGGGAAGAGTCCAGTG 26699297 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||| ||||| | |||||| | |||| ||| ||| || Sbjct 26699298 TTGAATCCCTGCCCCACAGTGGGGTGTGGGAAATGGGGCATA 26699339 >seq287 Length=33263144 Score = 95.1 bits (104), Expect = 6e-18 Identities = 63/70 (90%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 4 AAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCG 63 |||||||||||||| |||||||||||||| ||| |||||||||| ||||||||||| || Sbjct 4842492 AAAGAAACTAACCACGATTCCCTCAGTAATGGCAAGTGAACAGGTAAGAGCCCAGCACCA 4842551 Query 64 AATCCCCGCC 73 |||||| ||| Sbjct 4842552 AATCCCTGCC 4842561 >seq84 Length=50890351 Score = 89.7 bits (98), Expect = 2e-16 Identities = 77/95 (81%), Gaps = 3/95 (3%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||| ||||||||||||||||||| ||||| || ||||||||| | ||||| || | Sbjct 19115671 GGAAAATAAACTAACCAGGATTCCCTTAGTAAAGGTGAGTGAACA---AGGAGCCTAGTG 19115727 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATG 95 || |||| | | ||| ||||||| |||||| ||| Sbjct 19115728 CCAAATCGCTGTCCCTTGGTGGGGTGCGGGAAATG 19115762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230395671360