Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25] 2,004 sequences; 2,789,656,328 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq633 206 6e-51 >seq633 Length=51153 Score = 206 bits (228), Expect = 6e-51 Identities = 258/348 (74%), Gaps = 18/348 (5%) Strand=Plus/Plus Query 27 ATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGG 86 ||||||||||| ||| || |||||||| | | ||||| || ||| ||||| | | Sbjct 39571 ATTTCACCGAGCCTACAGTCGAGACAGTCAAGAGCTGGTTACACCATTCAAGCGGGACAG 39630 Query 87 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAC 146 || ||||| |||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 39631 AATTTACCTGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 39690 Query 147 TGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGA--TCC--CCTTAACCTTCCAGCA 202 |||||||||| |||| | || | || ||| | || |||||| ||| Sbjct 39691 CAGGGCTTAAGTCAGAAGCTTTGGACTTTCAGCCTGACCTCCTTCTTTGACCTTCTGGCA 39750 Query 203 CCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGG 262 ||||||||| ||| | | ||||| || | || | || ||| | | ||||||||||| Sbjct 39751 CCGGGCAGGTGTCGCCACATATACTTCATGTTTGAATTTTGCATATAGCTGTGTTTTTGT 39810 Query 263 TAAACAGTCGCTTGGGCCT-ATTCT---CTGCGGCC-----TGTCATAGACAGGCACCCC 313 ||||||||| | ||| ||||| ||| | || |||||| | ||||||| | Sbjct 39811 TAAACAGTC----CGCCCTCATTCTTTACTGTGACCTGCAATGTCATTG-CAGGCACTCT 39865 Query 314 TTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTT 361 ||||||||||||||| | || | ||||| |||||||||||| ||||| Sbjct 39866 TTCTCCCTAAGTTACAGAGTTAATTTGCAGAGTTCCTTAACTGTAGTT 39913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062378709504