Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25] 2,004 sequences; 2,789,656,328 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq729 242 1e-61 >seq729 Length=16139 Score = 242 bits (268), Expect = 1e-61 Identities = 347/485 (72%), Gaps = 28/485 (6%) Strand=Plus/Minus Query 15 TGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGA 74 |||||||||||| |||||||||||||| | ||||| |||||||||||| | ||||||||| Sbjct 13051 TGAAACTCAAAGAAATTGACGGGGACCTGAACAAGTGGTGGAGCATGTTGCTTAATTCGA 12992 Query 75 AGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTG-ACCCCTCTAGAGATAGAGGT 133 || |||| ||||||||| | |||| ||| | || | || |||| ||| || Sbjct 12991 TAATACACGAAAAACCTTACCGAGGCTTGTAATCTTTTGCAAAGCTATAGAAATATAG-- 12934 Query 134 TTCCCCTTCGGGGGA-CAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGA 192 | || | |||| ||||||||| ||||||| ||||||||||||||||| ||| Sbjct 12933 ------TGGAGGCTATCAGAATGACAGGTGGTGCATGGCTGTCGTCAGCTCGTGTCTTGA 12880 Query 193 GATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTT 252 |||||| |||||||||||| ||||||||||||||| |||||| || | Sbjct 12879 GATGTTTGGTTAAGTCCCGTAACGAGCGCAACCCTACTCTTTAGTT----------AGAT 12830 Query 253 GGGCACTCTAAGTTGACTG-CCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATC 311 | ||||| |||||| || | | | ||||||| ||| | | ||||| || Sbjct 12829 AG---TTCTAAAGTGACTGAATCGTAAGATA---TAGGAAGGCTGGGGCCAAGTCAAGTC 12776 Query 312 ATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCG 371 ||||||||||||||| | ||||| || |||||||||||||| ||||| | | || Sbjct 12775 ATCATGCCCCTTATGCCTCGGGCTGCAAACGTGCTACAATGGTAGGTACAATGTGTCGCA 12716 Query 372 AAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAAC 431 | | | ||| |||| | ||||| ||||||| ||||| || |||||| Sbjct 12715 ATCTAGTAATAGTGAGCTAATCACCTAAAGCCTATCTCAGTCCGGATAAAAGGCTGCAAT 12656 Query 432 TCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-ATGCTACGGTGAATACG 490 ||| |||| ||||| ||||||| ||||||||| | ||||| || | ||||||| || Sbjct 12655 TCGCCTATTTGAAGTTGGAATCACTAGTAATCCTGTGTCAGCTATATCAGGGTGAATGCG 12596 Query 491 TTCCC 495 ||||| Sbjct 12595 TTCCC 12591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503969859840