Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25] 2,004 sequences; 2,789,656,328 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq368 143 4e-32 seq1 143 4e-32 seq344 141 1e-31 >seq368 Length=84932903 Score = 143 bits (158), Expect = 4e-32 Identities = 162/212 (76%), Gaps = 9/212 (4%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||| | ||||| |||| | |||||||||||||||||||||||||||||| || Sbjct 67590590 GTCAGTGTAGCACACGTGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 67590648 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA---GCCAGCCACCAAC--CA 129 ||| | || |||||| | |||| | ||||||||||||| | | || | Sbjct 67590649 CAATC-TCAGGTGGCTGAATGCCACTTGTCCCTCTAAGAAGTTGGGGGATGTTGACTGCT 67590707 Query 130 TAGTCG--ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | | | ||| ||| |||||| | | ||||| ||| ||||| ||||||| ||||| Sbjct 67590708 TGGGGGTCATGTAACTAGTTAGCATGCCAGAGTCTCATTCATTATCAGAATTAAACAGAC 67590767 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||| |||||||||||||||||| |||||||| Sbjct 67590768 AAATTACTCCACCAACTAAGAACTGCCATGCA 67590799 >seq1 Length=126035930 Score = 143 bits (158), Expect = 4e-32 Identities = 102/117 (87%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | || ||||| || ||||||| |||||||||||||||| |||||||| Sbjct 19519833 CTAGTTAGCATTTCAAAGTCTCATTTGTTATCGAAATTAACCAGACAAATTGCTCCACCA 19519774 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| ||||| |||||||||| ||||||| || Sbjct 19519773 ACTAAGAACGGCCATGCACCACCACCCACAGAATTGAGAAAGAGCTGTCAATCTATC 19519717 >seq344 Length=82825804 Score = 141 bits (156), Expect = 1e-31 Identities = 92/101 (91%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 158 GGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATG 217 |||||| ||| |||| ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 77270761 GGTCTCATTCCTTATTAGAATTTACCAGACAAATCACTCCACCAACTAAGAATGGCCATG 77270820 Query 218 CACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||| |||||| |||||||||| |||||||||| Sbjct 77270821 CACCACCACCCACAGAATCGAGAAAGAGCTGTCAATCTGTC 77270861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796784531124