Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25]
2,004 sequences; 2,789,656,328 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq368 143 4e-32
seq1 143 4e-32
seq344 141 1e-31
>seq368
Length=84932903
Score = 143 bits (158), Expect = 4e-32
Identities = 162/212 (76%), Gaps = 9/212 (4%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||| | ||||| |||| | |||||||||||||||||||||||||||||| ||
Sbjct 67590590 GTCAGTGTAGCACACGTGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 67590648
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA---GCCAGCCACCAAC--CA 129
||| | || |||||| | |||| | ||||||||||||| | | || |
Sbjct 67590649 CAATC-TCAGGTGGCTGAATGCCACTTGTCCCTCTAAGAAGTTGGGGGATGTTGACTGCT 67590707
Query 130 TAGTCG--ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187
| | | ||| ||| |||||| | | ||||| ||| ||||| ||||||| |||||
Sbjct 67590708 TGGGGGTCATGTAACTAGTTAGCATGCCAGAGTCTCATTCATTATCAGAATTAAACAGAC 67590767
Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCA 219
|||| |||||||||||||||||| ||||||||
Sbjct 67590768 AAATTACTCCACCAACTAAGAACTGCCATGCA 67590799
>seq1
Length=126035930
Score = 143 bits (158), Expect = 4e-32
Identities = 102/117 (87%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| |||||| | || ||||| || ||||||| |||||||||||||||| ||||||||
Sbjct 19519833 CTAGTTAGCATTTCAAAGTCTCATTTGTTATCGAAATTAACCAGACAAATTGCTCCACCA 19519774
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||||||||||| ||||| |||||||||| ||||||| ||
Sbjct 19519773 ACTAAGAACGGCCATGCACCACCACCCACAGAATTGAGAAAGAGCTGTCAATCTATC 19519717
>seq344
Length=82825804
Score = 141 bits (156), Expect = 1e-31
Identities = 92/101 (91%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 158 GGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATG 217
|||||| ||| |||| ||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 77270761 GGTCTCATTCCTTATTAGAATTTACCAGACAAATCACTCCACCAACTAAGAATGGCCATG 77270820
Query 218 CACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||| |||||| |||||||||| ||||||||||
Sbjct 77270821 CACCACCACCCACAGAATCGAGAAAGAGCTGTCAATCTGTC 77270861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796784531124
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |