Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25] 2,004 sequences; 2,789,656,328 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq633 152 2e-34 >seq633 Length=51153 Score = 152 bits (168), Expect = 2e-34 Identities = 309/457 (68%), Gaps = 14/457 (3%) Strand=Plus/Plus Query 134 GACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTT 193 |||||| |||||| || ||| | |||||||||||| | | | | |||| ||| Sbjct 40732 GACGCTAGTCCTAAAACTATATCGACAAAAACCAGCTATCAGGGAACTCGCTTGGAATTT 40791 Query 194 CACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGC 253 |||| ||| ||||| ||||||| || ||||||| ||| ||||||| ||| || Sbjct 40792 CACCTCTAGCCACAAGTCATCCGCTATCATTTCAACGACAGTCGGTTCGGCCCTTCATCT 40851 Query 254 GGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGT 313 | | ||| | |||| ||||| ||||| ||| || | ||||||||| | Sbjct 40852 GATGTTATTCAAATTTCAGCCTGCTCATGGCTAGCTCGTCCCCTTTCGGGTCTATTGCAA 40911 Query 314 GCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCT 373 | ||| | |||||||||| |||||||||||||| | ||| || ||||| | Sbjct 40912 CCTACTAAAACGCCCTATTAAGACTCGCTTTCGCTTCAGCT-CCATTTTTCATTTAACTT 40970 Query 374 CGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCT 433 || || | | ||||| | ||||||| |||||||| ||||||| | || || | Sbjct 40971 TGCAAC-CTGCAATAACTCTCCGGCTCATACTTCAAAACGCACGCCATTAC-----ACAT 41024 Query 434 AAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCC 493 || | ||| ||| |||||||| | ||||| || ||||||||||||| Sbjct 41025 GAA-------TGTGCTTTGACTCTTTGTAGGCTAGTAATTTCATGTTCTATTTCACTCCC 41077 Query 494 CGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAG 553 |||| ||||||| |||||| |||| |||||||| | |||||||| | | || Sbjct 41078 ATATCTGGGTTCTTTTCATCTTTCCTTCACAGTACTTGTTCACTATCGGTAAATGATTAG 41137 Query 554 TATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACAC 590 ||||||| |||| | | |||||| | |||||| || Sbjct 41138 TATTTAGACTTACCCGATGGTCCGGGTGGATTCAGAC 41174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817563575296