Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25]
2,004 sequences; 2,789,656,328 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq729 159 6e-37
>seq729
Length=16139
Score = 159 bits (176), Expect = 6e-37
Identities = 209/285 (73%), Gaps = 6/285 (2%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCC-AGCAATCCGCCTTCGCCACTGGTG 59
||||||||||| |||||||||||| ||| ||||| || | |||||| ||| ||||||
Sbjct 13177 CCCACGCTTTCAAGCCTCAGCGTCAATTA-TGTCCTAGATACTCGCCTTAGCCTCTGGTG 13235
Query 60 TTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCC--GATTGCCTCTCCAG 117
|||||| |||||||||||||| |||||||||||| ||||||| || ||| | |
Sbjct 13236 TTCCTCAATATATCTACGCATTCCACCGCTACACATTGAATTCCAGTATCTCCTAACTA- 13294
Query 118 CACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTG 177
| || ||| || | | || | || | | ||| || | ||| ||| |
Sbjct 13295 -ATTCTAGACAAGCGATATCTATCACAAACAACCTGTTAGGCAAGTGCCTTTAACAATAG 13353
Query 178 ACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCT 237
| | | |||||||| | ||||||| |||||||||||||||||| ||||| ||||
Sbjct 13354 ATCAACTTGTCCGCCTACGCTTCCTTTACGCCCAATAAATCCGGATAATGCTTGTGACCT 13413
Query 238 ACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
| || ||||||| ||||||||||| |||||||| || |||||||
Sbjct 13414 ATGTTTTACCGCAGCTGCTGGCACATAGTTAGCTGTCACTTATTC 13458
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 828783909884
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |