Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25] 2,004 sequences; 2,789,656,328 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq729 159 6e-37 >seq729 Length=16139 Score = 159 bits (176), Expect = 6e-37 Identities = 209/285 (73%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCC-AGCAATCCGCCTTCGCCACTGGTG 59 ||||||||||| |||||||||||| ||| ||||| || | |||||| ||| |||||| Sbjct 13177 CCCACGCTTTCAAGCCTCAGCGTCAATTA-TGTCCTAGATACTCGCCTTAGCCTCTGGTG 13235 Query 60 TTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCC--GATTGCCTCTCCAG 117 |||||| |||||||||||||| |||||||||||| ||||||| || ||| | | Sbjct 13236 TTCCTCAATATATCTACGCATTCCACCGCTACACATTGAATTCCAGTATCTCCTAACTA- 13294 Query 118 CACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTG 177 | || ||| || | | || | || | | ||| || | ||| ||| | Sbjct 13295 -ATTCTAGACAAGCGATATCTATCACAAACAACCTGTTAGGCAAGTGCCTTTAACAATAG 13353 Query 178 ACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCT 237 | | | |||||||| | ||||||| |||||||||||||||||| ||||| |||| Sbjct 13354 ATCAACTTGTCCGCCTACGCTTCCTTTACGCCCAATAAATCCGGATAATGCTTGTGACCT 13413 Query 238 ACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 | || ||||||| ||||||||||| |||||||| || ||||||| Sbjct 13414 ATGTTTTACCGCAGCTGCTGGCACATAGTTAGCTGTCACTTATTC 13458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828783909884