Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25] 2,004 sequences; 2,789,656,328 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq633 78.8 9e-13 >seq633 Length=51153 Score = 78.8 bits (86), Expect = 9e-13 Identities = 111/156 (71%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||| ||||||||||||||||| ||||||||||||| ||| |||| || || Sbjct 39159 GTTGAGCGATAGCCCTTCCATTCAGAACTACCGGATCACTATAGCCTAATTTCTTACTTG 39218 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 |||| || |||| || |||||| | ||| ||| | || | |||| || Sbjct 39219 GTCGACTTGTTCGTCTCACAATCAAGCACACATATAGTATTACCCTTTAAACGCGATTTC 39278 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | || ||| || ||||| | || ||||||||| Sbjct 39279 CATTCGCGATAAGTGTACCTTTGCGCGCCTCCGTTA 39314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473590805648