Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25] 2,004 sequences; 2,789,656,328 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq633 201 2e-49 >seq633 Length=51153 Score = 201 bits (222), Expect = 2e-49 Identities = 200/259 (77%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAG 76 ||||||||| |||||| ||||| ||| |||| || |||| |||| |||| Sbjct 38827 CTTAGATGCTTTCAGCGTTTATCTAATCCGCTCTTATCTATTCAGCAATGCCTCTGGCGA 38886 Query 77 TACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTC 136 ||||||| | || ||| || || ||| ||||||||||||||||| | | ||||| Sbjct 38887 AACAACTGATACAACAGCGGAGCGTTCATTCCGGTCCTCTCGTACTAGGAATGAATCCTC 38946 Query 137 TCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCA 196 ||||||||||| | |||| || |||||||||| | ||||||| ||||| | |||||||| Sbjct 38947 TCAAATTTCCTTCAGCCACTACAGATAGGGACCAACCTGTCTCACGACGGTTTGAACCCA 39006 Query 197 GCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGG 256 ||| ||| || |||||| ||||||||||| ||||||||||| || ||||| ||||||| Sbjct 39007 ACTCACGTATCTTTTTAATCGGCGAACAGCCGAACCCTTGGGAGCTGCTTCACCCCCAGG 39066 Query 257 ATGAGACGAGCCGACATCG 275 || || ||| |||||||| Sbjct 39067 ATACGATGAGTCGACATCG 39085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780784841744