Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25] 2,004 sequences; 2,789,656,328 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq729 199 9e-49 >seq729 Length=16139 Score = 199 bits (220), Expect = 9e-49 Identities = 242/327 (74%), Gaps = 2/327 (1%) Strand=Plus/Minus Query 21 GCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACT 80 |||||||| ||||||||||| ||||||| || |||| | ||| ||||||||| ||| | Sbjct 13446 GCTAACTATGTGCCAGCAGCTGCGGTAAAACATAGGTCACAAGCATTATCCGGATTTATT 13387 Query 81 GGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCC 140 ||||||||||| ||||||| || | || || |||||| | || ||| Sbjct 13386 GGGCGTAAAGGAAGCGTAGGCGGACAAGTTGATCTATTGTTAAAGGCACTTGCCTAACAG 13327 Query 141 CGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTG 200 | || | || | || | ||||| | ||| | | |||||||| ||| Sbjct 13326 GTTGTTTGTGATAGATATCGCTTGTCTAGAATTAGTTAGGAGATACTGGAATTCAATGTG 13267 Query 201 TAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCT-GGAC 259 |||||||| ||||||||||||| |||||||||||| ||| |||||| | || |||| Sbjct 13266 TAGCGGTGGAATGCGTAGATATATTGAGGAACACCAGAGGCTAAGGCGAGTATCTAGGAC 13207 Query 260 TGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 319 ||| |||| |||||||| |||||||||||||||||| ||||||||||||| ||||| Sbjct 13206 A-TAATTGACGCTGAGGCTTGAAAGCGTGGGGAGCAAATGGGATTAGATACCCCAGTAGT 13148 Query 320 CCACGCCGTAAACGATGAATACTAGGT 346 ||||||||||||||||| || ||||| Sbjct 13147 CCACGCCGTAAACGATGGGTATTAGGT 13121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203175887872