Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25] 2,004 sequences; 2,789,656,328 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq633 111 5e-22 >seq633 Length=51153 Score = 111 bits (122), Expect = 5e-22 Identities = 303/454 (67%), Gaps = 15/454 (3%) Strand=Plus/Minus Query 33 TAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGG 92 ||||||||||| || ||| ||||| |||| |||| | ||||| || Sbjct 40905 TAGACCCGAAAGGGGACGAGCTAGCCATGAGCAGGCTGAAATTTGAATAACATCAGATGA 40846 Query 93 AGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152 ||| ||||||| ||| ||||||| ||| |||||| ||||| ||| ||||||| | Sbjct 40845 AGGGCCGAACCGACTGTCGTTGAAATGATAGCGGATGACTTGTGGCTAGAGGTGAAATTC 40786 Query 153 TAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGT-- 210 || | | | |||||||||| | ||| | |||||| || ||| || Sbjct 40785 CAAGCGAGTTCCCTGATAGCTGGTTTTTGTCGATATAGTTTTAGGACTAGCGTCA-GTCG 40727 Query 211 --ATCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACC 268 || | | || |||| |||||| || || ||| | |||| ||||||| Sbjct 40726 AAATAATTAGTGGAGGTAAAGCACTAA-ATCTATAAGGGCATCTCGCGATGTACCAAATA 40668 Query 269 --ATTGCAAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAG 326 ||| |||||| |||| | ||| |||||| || |||||| || | | |||| Sbjct 40667 GAATT--AAACTCTGAATTCCACTCA-TTTTACACTGGCAGTGAGACTATTTGGGATAAG 40611 Query 327 GTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAA 386 | | || |||| |||| || ||| | || ||||| ||| |||| | |||||| Sbjct 40610 CTTTATAGTCGTGAGGGAAAGAGCCCAGACCAACAAATAAGGTCCCAAAATTA-AGCTAA 40552 Query 387 GTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATT 446 || || || || ||| | | | | ||| ||||||||||||||| || |||||||| Sbjct 40551 GTGGAA--AAGGAGGTCAAAATTCATAAACAACTAGGATGTTGGCTTAGAGGCAGCCAT- 40495 Query 447 CATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 |||||||||||||||||| |||||||||||| || Sbjct 40494 CATTTAAAGAGTGCGTAATAGCTCACTAGTCTAG 40461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689566140416