Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25] 2,004 sequences; 2,789,656,328 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq633 197 5e-48 >seq633 Length=51153 Score = 197 bits (218), Expect = 5e-48 Identities = 339/484 (70%), Gaps = 11/484 (2%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| ||||| || |||||| | | | | |||| || || |||| || Sbjct 39220 TCGACTTGTTCGTCTCACAATCAAGCACACATATAGTATTACCCTTTAAACGCGATTTCC 39279 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 | | | | || | ||||||| ||||||||||||| |||| ||||| |||||||||||| Sbjct 39280 ATTCGCGATAAGTGTACCTTTGCGCGCCTCCGTTACTTTTTAGGAGG-CAACCGCCCCAG 39338 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCA-TGGGCCAAGGTTAGATATCCA 179 | ||||| |||||| |||||||| || |||||| | ||| | | || ||| | Sbjct 39339 TCAAACTGCCCACCTAACACTGTCCATAAACCAGATAAATGGTCTCATGTAAGAAAAAAT 39398 Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 | | | |||||||| || |||||||| | |||||||| | | || ||| Sbjct 39399 TGATTGAAATTGTGGTATTCCACTGTCGACTCCAACAACACTAGCGCATCATCTTCCTAG 39458 Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGC---CAATACCAAGCTATAGTGAAGG 296 |||||||| ||| || | || || ||| ||||| |||| || ||| ||| Sbjct 39459 TCTCCCACATATTCT---CTAATATCAATAAATTTTCACAATATCAAGTTACAGTAAAGC 39515 Query 297 TCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTC 355 | | |||||||| ||||| ||| || ||| |||| |||| || ||||| Sbjct 39516 TTCATAGGGTCTTTCCGTCCCATAGCGGCAAGAGAGTGTCTTCACTCTCACCAGGATTTC 39575 Query 356 ACCGGGCCTGTGGTTGAGACAG-CAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACT 414 |||| |||| || ||||||| || | | | ||||| |||||| || || | ||| | Sbjct 39576 ACCGAGCCTACAGTCGAGACAGTCAAGAGC-TGGTTACACCATTCAAGCGGGACAGAATT 39634 Query 415 TACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGG 474 |||| ||||||||||||||||||||||||| ||||||||||| |||||||| || || Sbjct 39635 TACCTGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCAGG 39694 Query 475 GCTT 478 |||| Sbjct 39695 GCTT 39698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702365883904