Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25]
2,004 sequences; 2,789,656,328 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq633 197 5e-48
>seq633
Length=51153
Score = 197 bits (218), Expect = 5e-48
Identities = 339/484 (70%), Gaps = 11/484 (2%)
Strand=Plus/Plus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||||||| ||||| || |||||| | | | | |||| || || |||| ||
Sbjct 39220 TCGACTTGTTCGTCTCACAATCAAGCACACATATAGTATTACCCTTTAAACGCGATTTCC 39279
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
| | | | || | ||||||| ||||||||||||| |||| ||||| ||||||||||||
Sbjct 39280 ATTCGCGATAAGTGTACCTTTGCGCGCCTCCGTTACTTTTTAGGAGG-CAACCGCCCCAG 39338
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCA-TGGGCCAAGGTTAGATATCCA 179
| ||||| |||||| |||||||| || |||||| | ||| | | || ||| |
Sbjct 39339 TCAAACTGCCCACCTAACACTGTCCATAAACCAGATAAATGGTCTCATGTAAGAAAAAAT 39398
Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239
| | | |||||||| || |||||||| | |||||||| | | || |||
Sbjct 39399 TGATTGAAATTGTGGTATTCCACTGTCGACTCCAACAACACTAGCGCATCATCTTCCTAG 39458
Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGC---CAATACCAAGCTATAGTGAAGG 296
|||||||| ||| || | || || ||| ||||| |||| || ||| |||
Sbjct 39459 TCTCCCACATATTCT---CTAATATCAATAAATTTTCACAATATCAAGTTACAGTAAAGC 39515
Query 297 TCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTC 355
| | |||||||| ||||| ||| || ||| |||| |||| || |||||
Sbjct 39516 TTCATAGGGTCTTTCCGTCCCATAGCGGCAAGAGAGTGTCTTCACTCTCACCAGGATTTC 39575
Query 356 ACCGGGCCTGTGGTTGAGACAG-CAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACT 414
|||| |||| || ||||||| || | | | ||||| |||||| || || | ||| |
Sbjct 39576 ACCGAGCCTACAGTCGAGACAGTCAAGAGC-TGGTTACACCATTCAAGCGGGACAGAATT 39634
Query 415 TACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGG 474
|||| ||||||||||||||||||||||||| ||||||||||| |||||||| || ||
Sbjct 39635 TACCTGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCAGG 39694
Query 475 GCTT 478
||||
Sbjct 39695 GCTT 39698
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1702365883904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |