Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25]
2,004 sequences; 2,789,656,328 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq2002 104 4e-20
seq247 87.8 3e-15
seq201 77.0 5e-12
>seq2002
Length=88924
Score = 104 bits (114), Expect = 4e-20
Identities = 93/114 (82%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| | || | || |||| || || |
Sbjct 7579 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 7522
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 7521 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 7468
>seq247
Length=91754291
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/114 (79%), Gaps = 3/114 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||| |||||||||||| | |||||| | ||||| | || | || |||| || ||
Sbjct 19680587 GTAGGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAA- 19680643
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
|| | |||||||||||||| |||||||| ||||||||||||| ||||||||||
Sbjct 19680644 GCGGGGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTACGTCAGAATCC 19680697
>seq201
Length=128595539
Score = 77.0 bits (84), Expect = 5e-12
Identities = 84/109 (77%), Gaps = 2/109 (2%)
Strand=Plus/Minus
Query 6 AGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGC 65
||||||||| | | |||||| | ||| | | || | || |||| || || || |
Sbjct 76038925 AGAGGAACCACAGG-TTCAGAC-ATTTGTTGTATGTGCTTGGCTGAGGAGCCAATGGGGT 76038868
Query 66 GAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
|||||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct 76038867 GAAGCTACCATCTGTGGGATTATGACTGAATGCCTCTAAGTCAGAATCC 76038819
Score = 73.4 bits (80), Expect = 6e-11
Identities = 51/58 (88%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAG 121
|| ||||||||||||| |||||||| |||||| ||||||||||||||||| | ||||
Sbjct 43990655 GCAAAGCTACCATCTGTGGGATTATGACTGAACACCTCTAAGTCAGAATCCCTCCCAG 43990598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819184096256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |