Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25]
2,004 sequences; 2,789,656,328 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq227 158 4e-36
seq68 109 2e-21
seq247 86.0 2e-14
>seq227
Length=108555830
Score = 158 bits (174), Expect = 4e-36
Identities = 150/191 (79%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 26 AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTG 85
|| ||| ||||||| |||| ||||||||| ||||| | || |||| |||||||||||
Sbjct 74747095 AATGAGTCCTGTATTTTAATTTTTTGTCACTATCTCCCTGGGTTGGGAGTGGGTAATTTG 74747036
Query 86 CGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGA 145
| || ||||||||||||| |||||||||||| |||||||| || | |||||||||| |
Sbjct 74747035 CATGCTTGCTGCCTTCCTTAGATGTGGTAGCCATTTCTCAGACT--CACTCCGGAATCAA 74746978
Query 146 ACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTT 205
|| || ||| || || |||| | | |||||||||||| ||| |||| ||||||
Sbjct 74746977 ACTCTGATTGCCTGTCACCCATGGTCACCATGGTAGGCATGGTGACTATCATCAAAAGTT 74746918
Query 206 GATAGGGCAGA 216
|||| ||||||
Sbjct 74746917 GATATGGCAGA 74746907
>seq68
Length=92142175
Score = 109 bits (120), Expect = 2e-21
Identities = 69/75 (92%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 79 TAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCG 138
|||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| |
Sbjct 65408790 TAATTTGCACGCCTGCTCCCTTCCTTAGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCTG 65408731
Query 139 GAATCGAACCCTAAT 153
|||| ||||||| ||
Sbjct 65408730 GAATTGAACCCTGAT 65408716
>seq247
Length=91754291
Score = 86.0 bits (94), Expect = 2e-14
Identities = 115/153 (75%), Gaps = 9/153 (6%)
Strand=Plus/Minus
Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGT-ACT-ATCAA 397
||||||||| |||||||||| |||||| | |||| | | | || || | | | |||
Sbjct 58815312 AGCATGTATCAGCTCTAGAACTACCACAGACATCCCAGAAAGAGAAAAGTGAGTGACCAA 58815253
Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCTTATAC 455
| | | | | ||||||||||||||||| | ||||||||||| || || || ||
Sbjct 58815252 AGGATCCACACATGATTTAATGAGCCATTTACCGTTTCACTGTACCAGCCATG--TACAC 58815195
Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGC 488
||| |||||||||||||||||||| |||||||
Sbjct 58815194 TTACACATGCATGGCTTAATCTTTCTGACAAGC 58815162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510369731584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |