Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25] 2,004 sequences; 2,789,656,328 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq227 158 4e-36 seq68 109 2e-21 seq247 86.0 2e-14 >seq227 Length=108555830 Score = 158 bits (174), Expect = 4e-36 Identities = 150/191 (79%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 26 AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTG 85 || ||| ||||||| |||| ||||||||| ||||| | || |||| ||||||||||| Sbjct 74747095 AATGAGTCCTGTATTTTAATTTTTTGTCACTATCTCCCTGGGTTGGGAGTGGGTAATTTG 74747036 Query 86 CGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGA 145 | || ||||||||||||| |||||||||||| |||||||| || | |||||||||| | Sbjct 74747035 CATGCTTGCTGCCTTCCTTAGATGTGGTAGCCATTTCTCAGACT--CACTCCGGAATCAA 74746978 Query 146 ACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTT 205 || || ||| || || |||| | | |||||||||||| ||| |||| |||||| Sbjct 74746977 ACTCTGATTGCCTGTCACCCATGGTCACCATGGTAGGCATGGTGACTATCATCAAAAGTT 74746918 Query 206 GATAGGGCAGA 216 |||| |||||| Sbjct 74746917 GATATGGCAGA 74746907 >seq68 Length=92142175 Score = 109 bits (120), Expect = 2e-21 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 79 TAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCG 138 |||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| | Sbjct 65408790 TAATTTGCACGCCTGCTCCCTTCCTTAGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCTG 65408731 Query 139 GAATCGAACCCTAAT 153 |||| ||||||| || Sbjct 65408730 GAATTGAACCCTGAT 65408716 >seq247 Length=91754291 Score = 86.0 bits (94), Expect = 2e-14 Identities = 115/153 (75%), Gaps = 9/153 (6%) Strand=Plus/Minus Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGT-ACT-ATCAA 397 ||||||||| |||||||||| |||||| | |||| | | | || || | | | ||| Sbjct 58815312 AGCATGTATCAGCTCTAGAACTACCACAGACATCCCAGAAAGAGAAAAGTGAGTGACCAA 58815253 Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCTTATAC 455 | | | | | ||||||||||||||||| | ||||||||||| || || || || Sbjct 58815252 AGGATCCACACATGATTTAATGAGCCATTTACCGTTTCACTGTACCAGCCATG--TACAC 58815195 Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGC 488 ||| |||||||||||||||||||| ||||||| Sbjct 58815194 TTACACATGCATGGCTTAATCTTTCTGACAAGC 58815162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510369731584