Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25] 2,004 sequences; 2,789,656,328 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq668 93.3 1e-14 >seq668 Length=30573 Score = 93.3 bits (102), Expect = 1e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 2678 CTAACTCAATCCTTATCAAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTA 2737 |||| | || ||||| ||||| || ||||| || ||| | | |||||| | | ||| Sbjct 9267 CTAATGCTATTCTTATAAAAGTAAATCAAATAGGAACTCTTTCAGAAACTCTAAAAACTA 9326 Query 2738 TCGAAATGGCGAAAGAAGCTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTG 2797 | || | || |||| |||||||| | | || ||||| | ||||| ||||||| Sbjct 9327 TGCAATTAGCTAAAGGAGCTGGATGATCTTGTATTGTTTCACATAGATCAGGAGAAACTG 9386 Query 2798 AAGATTCAACAATCGCTGATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTT 2857 ||||| | || || || ||||| || || | |||| || || ||||| || ||||||| Sbjct 9387 AAGATACTACTATTGCGGATATAGCTGTAGGTACTATGGCAGGACAAATAAAAACAGGTT 9446 Query 2858 CATTGTCACGTACTGACCGTATTGCTAAATACAA 2891 | || || | | || || |||| |||||||| Sbjct 9447 CTTTTTCTAGATCAGAACGAGTTGCAAAATACAA 9480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156034686676176