Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorocebus_20sabaeus_20[refseq_20GCF_5F000409795.2_202014-03-25] 2,004 sequences; 2,789,656,328 total letters Query= NC_031913.1 Length=41807 Score E Sequences producing significant alignments: (Bits) Value seq299 93.3 1e-14 >seq299 Length=130588469 Score = 93.3 bits (102), Expect = 1e-14 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 26630 TTTCGTCTACCATATTGTCAAAATATAGTGTTACTGTGTATGACATTTTTACCTCttttt 26689 |||||||||| || ||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct 9232071 TTTCGTCTACAATGTTGTCAAAAAATAATGTTACTGTGTATGACATTTTTACCTCTTTTT 9232130 Query 26690 t 26690 | Sbjct 9232131 T 9232131 Score = 82.4 bits (90), Expect = 2e-11 Identities = 55/60 (92%), Gaps = 1/60 (2%) Strand=Plus/Plus Query 26664 TGTGTATGACATTTTTACCTCtttttttCAAACTGCTACCGTGCTACCGATAAAATCTAA 26723 ||||| | ||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct 9231977 TGTGTTT-ACATTTTTACCTCTTTTTTCTAAACTGCTACCGTGCTACCGATAAATTCTAA 9232035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133657619207112