Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201
5-03-12] 13,124 sequences; 2,970,124,662 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq5015 132 7e-29
seq5348 84.2 3e-14
>seq5015
Length=19474990
Score = 132 bits (146), Expect = 7e-29
Identities = 167/224 (75%), Gaps = 4/224 (2%)
Strand=Plus/Plus
Query 11 CAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAG 70
||||||| || ||| || ||||| |||| | | ||||||||||||| |||| | | |
Sbjct 19312495 CAGGGACTTAATCAGTGCAAGCTT-ATGATGCACACTTACTAGGAATT-CCTCAGTCATG 19312552
Query 71 ACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCT 129
| || ||||| ||| | ||||||||||||| ||||| | ||||||| |||
Sbjct 19312553 AGGAATAATTGTAATCCCCAATCCCCATCACGAATGGGGTTCAACGGGTTACCCGCGCCT 19312612
Query 130 GTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACA 189
| |||| ||| | || || ||| |||||||||||||||||| |||| | |||
Sbjct 19312613 GCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACA 19312672
Query 190 TCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
||||||||||||||||||||||||||| ||||| || |||||
Sbjct 19312673 TCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 19312715
>seq5348
Length=30138891
Score = 84.2 bits (92), Expect = 3e-14
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220
|||||||||||| | ||| |||| | |||||||||||||||||||||||||||||| |||
Sbjct 3702812 TCAGTGTAGCGCACATGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 3702754
Query 221 AAACTTCCGTGGC 233
|| || |||||
Sbjct 3702753 AATCTCAGGTGGC 3702741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751904391660
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |