Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201 5-03-12] 13,124 sequences; 2,970,124,662 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq5015 132 7e-29 seq5348 84.2 3e-14 >seq5015 Length=19474990 Score = 132 bits (146), Expect = 7e-29 Identities = 167/224 (75%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 11 CAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAG 70 ||||||| || ||| || ||||| |||| | | ||||||||||||| |||| | | | Sbjct 19312495 CAGGGACTTAATCAGTGCAAGCTT-ATGATGCACACTTACTAGGAATT-CCTCAGTCATG 19312552 Query 71 ACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCT 129 | || ||||| ||| | ||||||||||||| ||||| | ||||||| ||| Sbjct 19312553 AGGAATAATTGTAATCCCCAATCCCCATCACGAATGGGGTTCAACGGGTTACCCGCGCCT 19312612 Query 130 GTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACA 189 | |||| ||| | || || ||| |||||||||||||||||| |||| | ||| Sbjct 19312613 GCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACA 19312672 Query 190 TCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||||||||||||||||||||||||||| ||||| || ||||| Sbjct 19312673 TCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 19312715 >seq5348 Length=30138891 Score = 84.2 bits (92), Expect = 3e-14 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 |||||||||||| | ||| |||| | |||||||||||||||||||||||||||||| ||| Sbjct 3702812 TCAGTGTAGCGCACATGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 3702754 Query 221 AAACTTCCGTGGC 233 || || ||||| Sbjct 3702753 AATCTCAGGTGGC 3702741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751904391660