Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201 5-03-12] 13,124 sequences; 2,970,124,662 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq4905 109 3e-22 seq8904 98.7 5e-19 seq5860 84.2 1e-14 seq8982 78.8 4e-13 >seq4905 Length=1458897 Score = 109 bits (120), Expect = 3e-22 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct 196424 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCAAGTGAACAGGTAAGAGCCCAGCA 196365 Query 61 CCGAATCCCCGCC 73 || |||||| ||| Sbjct 196364 CCAAATCCCTGCC 196352 >seq8904 Length=12418398 Score = 98.7 bits (108), Expect = 5e-19 Identities = 83/102 (81%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||| |||||||| |||||||| | || ||||||||||||||||||||| | Sbjct 10991007 GGAAAAGAAATGAACCAGGACTCCCTCAGCAGTAGCAAGTGAACAGGGAAGAGCCCAGTG 10991066 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||| ||||| | |||||| ||||| ||| ||| || Sbjct 10991067 TTGAATCCCTGCCCCACAGTGGGGTGCGGGTAATGGGGCATA 10991108 >seq5860 Length=1925457 Score = 84.2 bits (92), Expect = 1e-14 Identities = 46/46 (100%), Gaps = 0/46 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAG 46 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 188538 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAG 188493 >seq8982 Length=576967 Score = 78.8 bits (86), Expect = 4e-13 Identities = 76/97 (78%), Gaps = 3/97 (3%) Strand=Plus/Plus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 ||| | || ||||||||||||||| ||||| || |||||||||| | ||||| ||| Sbjct 296249 AAATGGAATTAACCAGGATTCCCTTAGTAAAGGTAAGTGAACAGG---CATCCCAGTGCC 296305 Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGC 99 |||||| ||||| |||||| | |||| ||||||| Sbjct 296306 AAATCCCTGCCCCTTGGTGGGCTGAGGGAAATGTGGC 296342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230371652160