Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201
5-03-12] 13,124 sequences; 2,970,124,662 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq5015 208 1e-51
seq8793 149 1e-33
seq5348 147 3e-33
seq7794 123 4e-26
>seq5015
Length=19474990
Score = 208 bits (230), Expect = 1e-51
Identities = 199/251 (79%), Gaps = 9/251 (4%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| |
Sbjct 19312643 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 19312701
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA---CCAAC---- 127
||| || | |||||| | |||| | |||||||||||||| | | || ||
Sbjct 19312702 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGAAGGCCGACTGCT 19312760
Query 128 CATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187
|| | ||| ||| | |||| | | |||||| ||| ||||| ||||| |||||||
Sbjct 19312761 CAGGGATCATGTAACTAGTCAGCATGCCATGGTCTCATTCCTTATCAGAATTTACCAGAC 19312820
Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247
||||| ||||||||||||| | |||||||||||||||||||||||||| ||||||||||
Sbjct 19312821 AAATCGCTCCACCAACTAAAACTGGCCATGCACCACCACCCATAGAATCGAGAAAGAGCT 19312880
Query 248 ATCAATCTGTC 258
||| ||| ||
Sbjct 19312881 GTCAGTCTATC 19312891
>seq8793
Length=9245426
Score = 149 bits (164), Expect = 1e-33
Identities = 103/117 (88%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| | |||| | || |||||||| |||||| ||||||||||||||||| ||||||||
Sbjct 2878459 CTAGTGAGCATTTCAAAGTCTCGTTTGTTATCAAAATTAACCAGACAAATCGCTCCACCA 2878518
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||
Sbjct 2878519 ACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATCTATC 2878575
>seq5348
Length=30138891
Score = 147 bits (162), Expect = 3e-33
Identities = 163/212 (77%), Gaps = 9/212 (4%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||||| | ||| |||| | |||||||||||||||||||||||||||||| ||
Sbjct 3702813 GTCAGTGTAGCGCACATGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 3702755
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA---GCCAGCCACCAAC--CA 129
||| | || |||||| | |||| | ||||||||||||| || | | || |
Sbjct 3702754 CAATC-TCAGGTGGCTGAATGCCACTTGTCCCTCTAAGAAGTTGCGGGATGCTGACTGCT 3702696
Query 130 TAGTCG--ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187
| | | ||| ||| |||||| | | ||||| ||| ||||| ||||||| |||||
Sbjct 3702695 TGGGGGTCATGTAACTAGTTAGCATGCCAGAGTCTCATTCATTATCAGAATTAAACAGAC 3702636
Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCA 219
|||| |||||||||||||||||| || |||||
Sbjct 3702635 AAATTACTCCACCAACTAAGAACTGCTATGCA 3702604
>seq7794
Length=341288
Score = 123 bits (136), Expect = 4e-26
Identities = 179/246 (73%), Gaps = 20/246 (8%)
Strand=Plus/Plus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
||||||| | || |||| |||||| |||||| ||||||||| |||||| || ||||
Sbjct 83290 CAGTGTAACACGTGTGCAGCCCAGGACATCTGAGGGCATCAGAGACCTACTA----CTCA 83345
Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCAC--CAACCATAGTC 134
|| | |||||| | |||| | |||||||||| |||| || || ||||| ||
Sbjct 83346 GTCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAAAAGCTAGGGACGCCAACCGC--TC 83402
Query 135 GATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCAC 194
| | | | ||| || | | ||||| ||||||||||||||||||||| | |
Sbjct 83403 G--GCGTTCACTTATCACGCCAGAGTCTC---CGTTATCGGAATTAACCAGACTC--CGC 83455
Query 195 TCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254
|||||||| ||||||||||||||||||||||| | ||| | ||| |||||||| ||
Sbjct 83456 TCCACCAA----GAACGGCCATGCACCACCACCCACGGGATCGATAAACAGCTATCAGTC 83511
Query 255 TGTCCT 260
||||
Sbjct 83512 AATCCT 83517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796698695844
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |