Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201 5-03-12] 13,124 sequences; 2,970,124,662 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq5015 159 7e-37 seq7794 107 4e-21 seq5348 91.5 3e-16 >seq5015 Length=19474990 Score = 159 bits (176), Expect = 7e-37 Identities = 187/249 (75%), Gaps = 3/249 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 19312741 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 19312684 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||||||||||||||||||| | || || || | | Sbjct 19312683 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCCTAC 19312624 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| ||| |||||| | | || | | ||||| ||||||| | | ||| Sbjct 19312623 CCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATTGGGGATTA 19312564 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| ||| | | ||||||| ||||||||| | | |||| ||| || ||||| Sbjct 19312563 CAATTATTCCTCATGACTGAGGAATTCCTAGTAAGTGTGCATCATAAGCTTGCACTGATT 19312504 Query 311 ACGTCCCTG 319 | ||||||| Sbjct 19312503 AAGTCCCTG 19312495 >seq7794 Length=341288 Score = 107 bits (118), Expect = 4e-21 Identities = 151/210 (72%), Gaps = 8/210 (4%) Strand=Plus/Minus Query 122 AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACG 181 |||||| ||||||||| |||||| |||||| |||| || | ||||||| | ||| | Sbjct 83337 AGGTCTCTGATGCCCTCAGATGTCCTGGGCTGCACACGTGTTACACTGGCTCAGC----G 83282 Query 182 AGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGAT 241 || | | ||| ||||| |||| |||||| || | || | | ||| | ||| Sbjct 83281 TGTGCCTACCCTATGCCGGCAGGTGCGGGTAACCTGTTGAACCCCATTCGCGATGGAATC 83222 Query 242 AGAGCATTGCAATTATTGCTCTTCAACGAGGAAT---GCCTAGTAAGCGCGTGTCATCAG 298 || | |||||||||||| | | ||| ||||||| || |||||| | | ||||| || Sbjct 83221 AGGG-ATTGCAATTATTCCCCAGCAATGAGGAATTAATCCCAGTAAGTGTGGGTCATAAG 83163 Query 299 CACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | |||||| ||| |||||||| ||||||| Sbjct 83162 CTTGCGTTGGTTAAGTCCCTGCGCTTTGTA 83133 >seq5348 Length=30138891 Score = 91.5 bits (100), Expect = 3e-16 Identities = 83/101 (82%), Gaps = 3/101 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 3702715 CTTCTTAGAGGGACAAGTGGCATTCAGCCACCTGA-GATTGAG-CAATAACAGGTCTGTG 3702772 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171 |||||||||||||| | |||| ||| | ||||||||||||| Sbjct 3702773 ATGCCCTTAGATGTCCGGGGCTGCATGTGCGCTACACTGAC 3702813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947075689472