Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201
5-03-12] 13,124 sequences; 2,970,124,662 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq5015 159 7e-37
seq7794 107 4e-21
seq5348 91.5 3e-16
>seq5015
Length=19474990
Score = 159 bits (176), Expect = 7e-37
Identities = 187/249 (75%), Gaps = 3/249 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 19312741 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 19312684
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| ||||||||||||||||||| | || || || | |
Sbjct 19312683 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCCTAC 19312624
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| ||||| ||| |||||| | | || | | ||||| ||||||| | | |||
Sbjct 19312623 CCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATTGGGGATTA 19312564
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| ||| | | ||||||| ||||||||| | | |||| ||| || |||||
Sbjct 19312563 CAATTATTCCTCATGACTGAGGAATTCCTAGTAAGTGTGCATCATAAGCTTGCACTGATT 19312504
Query 311 ACGTCCCTG 319
| |||||||
Sbjct 19312503 AAGTCCCTG 19312495
>seq7794
Length=341288
Score = 107 bits (118), Expect = 4e-21
Identities = 151/210 (72%), Gaps = 8/210 (4%)
Strand=Plus/Minus
Query 122 AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACG 181
|||||| ||||||||| |||||| |||||| |||| || | ||||||| | ||| |
Sbjct 83337 AGGTCTCTGATGCCCTCAGATGTCCTGGGCTGCACACGTGTTACACTGGCTCAGC----G 83282
Query 182 AGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGAT 241
|| | | ||| ||||| |||| |||||| || | || | | ||| | |||
Sbjct 83281 TGTGCCTACCCTATGCCGGCAGGTGCGGGTAACCTGTTGAACCCCATTCGCGATGGAATC 83222
Query 242 AGAGCATTGCAATTATTGCTCTTCAACGAGGAAT---GCCTAGTAAGCGCGTGTCATCAG 298
|| | |||||||||||| | | ||| ||||||| || |||||| | | ||||| ||
Sbjct 83221 AGGG-ATTGCAATTATTCCCCAGCAATGAGGAATTAATCCCAGTAAGTGTGGGTCATAAG 83163
Query 299 CACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| |||||| ||| |||||||| |||||||
Sbjct 83162 CTTGCGTTGGTTAAGTCCCTGCGCTTTGTA 83133
>seq5348
Length=30138891
Score = 91.5 bits (100), Expect = 3e-16
Identities = 83/101 (82%), Gaps = 3/101 (3%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 3702715 CTTCTTAGAGGGACAAGTGGCATTCAGCCACCTGA-GATTGAG-CAATAACAGGTCTGTG 3702772
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171
|||||||||||||| | |||| ||| | |||||||||||||
Sbjct 3702773 ATGCCCTTAGATGTCCGGGGCTGCATGTGCGCTACACTGAC 3702813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947075689472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |