Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colobus_20angolensis_20palliatus_20[refseq_20GCF_5F000951035.1_20201
5-03-12] 13,124 sequences; 2,970,124,662 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq5860 100 5e-19
seq3716 86.0 1e-14
seq9793 77.0 5e-12
seq10237 75.2 2e-11
>seq5860
Length=1925457
Score = 100 bits (110), Expect = 5e-19
Identities = 92/114 (81%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| | || | || |||| || || |
Sbjct 188212 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 188155
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||| ||||||||||
Sbjct 188154 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAGGTCAGAATCC 188101
>seq3716
Length=9310762
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||| ||||||||| | | |||||| | ||| | | || | || |||| || || |
Sbjct 2894359 GTACAAGAGGAACCACAGG-TTCAGAC-ATTTGTTGTATGTGCTTGGCTGAGGAGCCAAT 2894416
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct 2894417 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAATGCCTCTAAGTCAGAATCC 2894470
>seq9793
Length=9484999
Score = 77.0 bits (84), Expect = 5e-12
Identities = 74/94 (79%), Gaps = 1/94 (1%)
Strand=Plus/Plus
Query 21 TTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGC 80
|||||| | ||||| | || | || |||| || || || ||||||||||||||||
Sbjct 7240095 TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGT 7240153
Query 81 TGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
||||| || ||||| ||||||||||||||||||
Sbjct 7240154 GGGATTTTGACTGAATGCCTCTAAGTCAGAATCC 7240187
>seq10237
Length=12846578
Score = 75.2 bits (82), Expect = 2e-11
Identities = 67/84 (80%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 31 TTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGG 90
||||| | || | || |||| || || || |||||||||||||||| ||| ||||
Sbjct 12805881 TTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGACTATGA 12805940
Query 91 CTGAACGCCTCTAAGTCAGAATCC 114
||||| ||||||||||||||||||
Sbjct 12805941 CTGAAGGCCTCTAAGTCAGAATCC 12805964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819095847936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |