Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq2131349 149 3e-33
seq2135433 145 3e-32
seq2114942 145 3e-32
seq1702860 116 1e-23
seq1657679 114 5e-23
seq2129834 111 6e-22
seq2181527 102 3e-19
seq2404380 96.9 1e-17
seq2097589 91.5 6e-16
seq1574109 91.5 6e-16
seq2288652 89.7 2e-15
seq1728044 80.6 1e-12
seq2350400 77.0 1e-11
>seq2131349
Length=213
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 196 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 137
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 136 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCGGACCTGGGTATAGGGGCGA 77
>seq2135433
Length=201
Score = 145 bits (160), Expect = 3e-32
Identities = 104/120 (87%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 18 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 77
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||| ||| ||||| | |||||||||||||||
Sbjct 78 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAGTCGGTCGTCCGACCTGGGTATAGGGGCGA 137
>seq2114942
Length=201
Score = 145 bits (160), Expect = 3e-32
Identities = 104/120 (87%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 184 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 125
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| |||||||||||||||
Sbjct 124 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGCCCTGGGTATAGGGGCGA 65
>seq1702860
Length=6599
Score = 116 bits (128), Expect = 1e-23
Identities = 101/124 (81%), Gaps = 1/124 (1%)
Strand=Plus/Minus
Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615
|||||| |||| |||||| ||||||||||||||||||||| || |||| | ||||||
Sbjct 4525 AGCATAA-TGTTAGGACCCAAAAGATGGTGAACTATGCCTGGGCAGAGTGATGACAGAGG 4467
Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675
||||||||||||||| | || ||| ||| ||||||||| || || ||||||||||
Sbjct 4466 AAACTCTGGTGGAGGTCTGTAGTGGTCCTGACGTGCAAATTTGTCATCTGATTTGGGTAT 4407
Query 676 AGGG 679
||||
Sbjct 4406 AGGG 4403
>seq1657679
Length=3863
Score = 114 bits (126), Expect = 5e-23
Identities = 90/108 (83%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615
|||| | |||| |||||||||||||||||||||||| ||| |||| ||||||||||
Sbjct 3282 AGCACACGTGTTAGGACCCGAAAGATGGTGAACTATGTCTGGGCAGGGCGAAGCCAGAGA 3223
Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663
| | ||||||||||| ||||| ||| ||| ||||||||||| |||||
Sbjct 3222 AGATTCTGGTGGAGGTCCGCAGTGGTCCTGACGTGCAAATCGGTCGTC 3175
>seq2129834
Length=220
Score = 111 bits (122), Expect = 6e-22
Identities = 82/96 (85%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 588 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGC 647
||||||||| |||| |||||||||||||||||||||||||| || |||||| ||| |
Sbjct 220 CTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTGAC 161
Query 648 GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||||||| ||||| | |||||||||||||||
Sbjct 160 GTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 125
>seq2181527
Length=225
Score = 102 bits (112), Expect = 3e-19
Identities = 73/84 (87%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659
|||| |||||||||||||||||||||||||| || |||||| ||| ||||||||||| |
Sbjct 220 AGGGCGAAGCCAGAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGT 161
Query 660 CGTCAAATTTGGGTATAGGGGCGA 683
|||| | |||||||||||||||
Sbjct 160 CGTCCGACCTGGGTATAGGGGCGA 137
>seq2404380
Length=229
Score = 96.9 bits (106), Expect = 1e-17
Identities = 61/66 (92%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 164 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 223
Query 624 GTGGAG 629
||||||
Sbjct 224 GTGGAG 229
>seq2097589
Length=203
Score = 91.5 bits (100), Expect = 6e-16
Identities = 86/110 (78%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 92 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 151
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAG 149
| ||| ||||||||||| ||||||| || | ||||| |||||||
Sbjct 152 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAG 201
>seq1574109
Length=14762
Score = 91.5 bits (100), Expect = 6e-16
Identities = 91/118 (77%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| | ||| ||||||| || ||||||||||| || | |||||||||||||||||||
Sbjct 14088 TGTTAGCACCTGAAAGATAGTAAACTATGCCTGGGCAGAGCGAAGCCAGAGGAAACTCTG 14147
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
| | ||| || ||| || ||| | ||||||||| || || |||||| ||||||
Sbjct 14148 GAGTAGGTCCGTAGCAGTCCTGCCATGCAAATCGTTCATCCGGCCTGGGTACAGGGGC 14205
>seq2288652
Length=3616
Score = 89.7 bits (98), Expect = 2e-15
Identities = 93/120 (78%), Gaps = 4/120 (3%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||| ||||||||||| ||||| |||| |||||||||| | ||||
Sbjct 1738 TGTTAGGACCCGAAAAATGGTGAACTACGCCTGGGCAGGGCGAAGCCAGAGTA---TCTG 1794
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||| ||||||||| ||| | ||||| || ||| | ||||||| |||||||
Sbjct 1795 GTGGAGATACGCAGCGGTCCTGACATGCAACTCCCCTGTCCAGCCTGGGTAT-GGGGCGA 1853
>seq1728044
Length=2861
Score = 80.6 bits (88), Expect = 1e-12
Identities = 94/127 (74%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
||||| || |||| ||||| |||||||||||| ||||| |||| || | |||||||||
Sbjct 219 GAGCACAGGTGTTAGGACCGGAAAGATGGTGAGCTATGACTGAGCAGTGCAAAGCCAGAG 278
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
||| ||||||| ||| | ||| | || ||||||||| || | | | ||||
Sbjct 279 AAAATTCTGGTGTAGGTCTGTAGCAATCCTAAAGTGCAAATCAGTCCGCCGACCTCGGTA 338
Query 675 TAGGGGC 681
|||||||
Sbjct 339 TAGGGGC 345
>seq2350400
Length=1167
Score = 77.0 bits (84), Expect = 1e-11
Identities = 87/117 (74%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
||||| |||||||||||||||||| | || || |||||| | ||||| |||||||
Sbjct 881 GAGTCAGGTTGTTTGGGAATGCAGCCCAAAGCAGGTGGTAAACCCCATCTAAGGCTAAAT 940
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156
| |||| ||||| ||| ||||||| | | ||||| ||||||| ||||||
Sbjct 941 ACTGGCACAAGACCAGTAGTCAACAAGTACAATATGGGAAAGTTGAAAAGAACTTTG 997
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2010688507750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |