Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012 -01-05] 3,231,305 sequences; 2,855,365,987 total letters Query= AAMG01000530.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq2590721 109 5e-22 seq3035651 105 7e-21 seq2525900 102 8e-20 seq2187792 93.3 4e-17 seq2826609 84.2 2e-14 seq1360282 82.4 8e-14 seq2233335 80.6 3e-13 seq1396919 80.6 3e-13 seq1236897 80.6 3e-13 seq465151 80.6 3e-13 seq2655672 78.8 9e-13 seq891674 77.0 3e-12 seq453629 77.0 3e-12 seq2218369 75.2 1e-11 seq3131657 73.4 4e-11 seq1405453 73.4 4e-11 seq1118677 73.4 4e-11 seq929926 73.4 4e-11 seq853467 73.4 4e-11 >seq2590721 Length=360 Score = 109 bits (120), Expect = 5e-22 Identities = 83/98 (85%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 9 CCCGTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCA 68 || |||||||||||||||| ||| | ||||||| |||||||||||||| || |||| ||| Sbjct 175 CCTGTGATATAGTTCCTAACATCCAGGTGGGGATAGGATGATATTACTGCCCATATCGCA 116 Query 69 CAAATTGTAAAACCCTTTCGATATATTTCCTACAATCC 106 | | || ||||||||||||||||| | ||||| |||| Sbjct 115 CGAGTTATAAAACCCTTTCGATATTTAGCCTACGATCC 78 >seq3035651 Length=231 Score = 105 bits (116), Expect = 7e-21 Identities = 82/98 (84%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 9 CCCGTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCA 68 || |||||||||||||||||||| | |||||| |||||| ||||||| || |||| ||| Sbjct 48 CCTGTGATATAGTTCCTAATATCCAGGTGGGGTTAGGATGGTATTACTGCCCATATCGCA 107 Query 69 CAAATTGTAAAACCCTTTCGATATATTTCCTACAATCC 106 | | ||||||||||| |||||||| | ||||| |||| Sbjct 108 CGAGTTGTAAAACCCCTTCGATATTTAGCCTACGATCC 145 >seq2525900 Length=525 Score = 102 bits (112), Expect = 8e-20 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 1 TAGAGCGTCCCGTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCA 60 || ||| || |||||||||||||||| ||| | ||||||| |||| ||||||| | || Sbjct 57 TACAGCCGCCTGTGATATAGTTCCTAACATCCAGGTGGGGATAGGAGGATATTATTGCCC 116 Query 61 ATATGGCACAAATTGTAAAACCCTTTCGATATATTTCCTAC 101 |||| |||||| ||||||||||| |||||||| | ||||| Sbjct 117 ATATCGCACAAGTTGTAAAACCCCTTCGATATTTAGCCTAC 157 >seq2187792 Length=215 Score = 93.3 bits (102), Expect = 4e-17 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 1 TAGAGCGTCCCGTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCA 60 || ||| || |||||||||||||||| ||| | ||||||| |||||||||||||| || Sbjct 191 TACAGCCACCTGTGATATAGTTCCTAACATCCAGGTGGGGATAGGATGATATTACTGCCC 132 Query 61 ATATGGCACAAATTGTAAAACCCTTTCGATATATTTCCTACAATCC 106 |||| ||| | ||||||||| | ||||||| | |||| |||| Sbjct 131 ATATCGCAGGAGTTGTAAAACTCCCTCGATATTTAGCCTATGATCC 86 >seq2826609 Length=208 Score = 84.2 bits (92), Expect = 2e-14 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 1 TAGAGCGTCCCGTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCA 60 || ||| || ||||||||||| |||| ||| | ||||||| |||||||||||||| || Sbjct 97 TACAGCCACCTGTGATATAGTTTCTAACATCCAGGTGGGGATAGGATGATATTACTGCCC 156 Query 61 ATATGGCACAAATTGTAAAACCCTTTCGATATATTTCCTACAATCC 106 |||| || | ||||||||| | | ||||| | ||||| |||| Sbjct 157 ATATCACAGGAGTTGTAAAACTCCCTAGATATTTAGCCTACGATCC 202 >seq1360282 Length=247 Score = 82.4 bits (90), Expect = 8e-14 Identities = 77/96 (80%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 12 GTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCACAA 71 |||||| ||||||||||| | | |||||||||||||||||||||||||||| ||| | Sbjct 53 GTGATACTGTTCCTAATATGCAGGAGGGGAGAGGATGATATTACTCCCAATATCGCAGGA 112 Query 72 ATTGTAAAACCCTTTC-GATATATTTCCTACAATCC 106 | | |||| ||| ||||||||||||| |||| Sbjct 113 GTGG--GCACCCATTCTGATATATTTCCTAATATCC 146 >seq2233335 Length=217 Score = 80.6 bits (88), Expect = 3e-13 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 1 TAGAGCGTCCCGTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCA 60 || ||| || |||||||||||||||| |||||||||||||||||||||||||||| || Sbjct 156 TACAGCCGCCTGTGATATAGTTCCTAACATCTAAGTGGGGAGAGGATGATATTACTGCCC 215 Query 61 AT 62 || Sbjct 216 AT 217 >seq1396919 Length=285 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 12 GTGATATAGTTCCTAATATCTAAGTGGGGA-GAGGATGATATTACTCCCAATATGGCACA 70 ||||||| ||||||| |||| | | | ||| ||||||||||||||||||||||| || | Sbjct 178 GTGATATTGTTCCTATTATCCAGGGGTGGAAGAGGATGATATTACTCCCAATATCACAGA 119 Query 71 AATTGTA-AAACCCTTTCGATATATTTCCTACAATCCA 107 || | || | ||||| |||||||||| || ||||| Sbjct 118 AAGTATACACCCCCTTGTGATATATTTCATAATATCCA 81 >seq1236897 Length=219 Score = 80.6 bits (88), Expect = 3e-13 Identities = 64/76 (84%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 11 CGTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCACA 70 |||||| | ||||||||||| | | ||||||||||| |||||||||||||||| ||| Sbjct 175 CGTGATGTTGTTCCTAATATTCATGGGGGGAGAGGATTATATTACTCCCAATATCGCAGG 116 Query 71 AATTGTAAAACCCTTT 86 || ||| ||||||||| Sbjct 115 AAGTGT-AAACCCTTT 101 >seq465151 Length=483 Score = 80.6 bits (88), Expect = 3e-13 Identities = 51/54 (94%), Gaps = 1/54 (2%) Strand=Plus/Minus Query 11 CGTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATAT 64 |||||||| |||| |||||||||| ||||||||||||||||||||||||||||| Sbjct 471 CGTGATATTGTTCGTAATATCTAA-TGGGGAGAGGATGATATTACTCCCAATAT 419 >seq2655672 Length=311 Score = 78.8 bits (86), Expect = 9e-13 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 8 TCCCGTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGC 67 ||| ||||||| |||||||||||| | || |||||| |||||||||||||||||||| || Sbjct 154 TCCTGTGATATTGTTCCTAATATCCAGGTAGGGAGAAGATGATATTACTCCCAATATTGC 213 Query 68 A 68 | Sbjct 214 A 214 >seq891674 Length=286 Score = 77.0 bits (84), Expect = 3e-12 Identities = 53/60 (88%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 9 CCCGTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCA 68 || ||||||| |||||||||||| | ||||||||||||||||||||| |||||| | ||| Sbjct 102 CCTGTGATATTGTTCCTAATATCCAGGTGGGGAGAGGATGATATTACACCCAATTTCGCA 43 >seq453629 Length=502 Score = 77.0 bits (84), Expect = 3e-12 Identities = 77/99 (78%), Gaps = 1/99 (1%) Strand=Plus/Minus Query 9 CCCGTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCA 68 || || |||||| ||| |||||||||| ||||||||||||||||||||||||| || Sbjct 99 CCTGTTATATAGCTCCCAATATCTAAGGAATGAGAGGATGATATTACTCCCAATATCGCT 40 Query 69 CAAATTGTA-AAACCCTTTCGATATATTTCCTACAATCC 106 |||| | |||||| ||||| ||||||| |||| Sbjct 39 GGGGGTGTACACACCCTTGAGATATTTTTCCTAATATCC 1 >seq2218369 Length=231 Score = 75.2 bits (82), Expect = 1e-11 Identities = 70/88 (80%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 20 GTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCACAAATTGTAAA 79 |||||| ||||| | |||||||||||||||||||||||||||||| | ||| |||| | Sbjct 200 GTTCCTGATATCCA-GTGGGGAGAGGATGATATTACTCCCAATATCAAAGAAAGTGTACA 142 Query 80 ACCCTTTCGATATATTTCCTACAATCCA 107 || | ||| | ||||||| || ||| Sbjct 141 CCCTCTATGATGTTTTTCCTAAAAGCCA 114 >seq3131657 Length=241 Score = 73.4 bits (80), Expect = 4e-11 Identities = 52/60 (87%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 9 CCCGTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCA 68 || ||||||| |||||||||||| ||| || ||||||||||| ||||| ||||||| ||| Sbjct 121 CCTGTGATATTGTTCCTAATATCCAAGGGGAGAGAGGATGATGTTACTTCCAATATTGCA 62 >seq1405453 Length=201 Score = 73.4 bits (80), Expect = 4e-11 Identities = 51/57 (89%), Gaps = 1/57 (2%) Strand=Plus/Plus Query 12 GTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCA 68 ||||||| |||| ||||||| | ||||||||||||||||||||||| |||||| ||| Sbjct 98 GTGATATTGTTCTTAATATCCA-GTGGGGAGAGGATGATATTACTCTCAATATCGCA 153 >seq1118677 Length=206 Score = 73.4 bits (80), Expect = 4e-11 Identities = 76/97 (78%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 12 GTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCACAA 71 |||||| ||||||||| || | ||||| |||||||||||||||||||||||| || Sbjct 3 GTGATACTGTTCCTAATTTCCACGTGGG-AGAGGATGATATTACTCCCAATATCACAGGG 61 Query 72 ATTGTAAA-ACCCTTTCGATATATTTCCTACAATCCA 107 || |||| || | || ||||| |||||| ||||| Sbjct 62 ATCATAAACACTCCTTTGATATTGTTCCTAATATCCA 98 >seq929926 Length=238 Score = 73.4 bits (80), Expect = 4e-11 Identities = 52/60 (87%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 9 CCCGTGATATAGTTCCTAATATCTAAGTGGGGAGAGGATGATATTACTCCCAATATGGCA 68 || ||||||| ||| |||||||| | | | |||||||||||||||||||||||||| ||| Sbjct 95 CCTGTGATATTGTTTCTAATATCCAGGAGAGGAGAGGATGATATTACTCCCAATATCGCA 36 >seq853467 Length=209 Score = 73.4 bits (80), Expect = 4e-11 Identities = 56/64 (88%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 10 CCGTGATATAGTTCCTAATATCTAAGTGG-GGAGAGGATGATATTACTCCCAATATGGCA 68 ||||||||| |||||||||||| | |||| ||||||||||||||||||||||| || || Sbjct 89 CCGTGATATTGTTCCTAATATCCA-GTGGAGGAGAGGATGATATTACTCCCAACATCACA 31 Query 69 CAAA 72 ||| Sbjct 30 GAAA 27 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495972727200