Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq2069642 212 1e-52
seq1521951 176 7e-42
seq47583 154 2e-35
seq422192 141 1e-31
seq1128806 140 5e-31
seq1611109 131 3e-28
seq2412127 122 1e-25
seq2829687 114 2e-23
seq2142821 93.3 7e-17
seq1815652 80.6 4e-13
seq1729297 77.0 5e-12
>seq2069642
Length=238
Score = 212 bits (234), Expect = 1e-52
Identities = 190/233 (82%), Gaps = 9/233 (4%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| |
Sbjct 231 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 173
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCA-T 130
||| || | |||||| | |||| | |||||||||||||| | | || ||| |
Sbjct 172 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCT 114
Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187
| | | | | ||| |||||| | | |||||||||||||||||||||||||||||
Sbjct 113 CGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 54
Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
||||| |||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 53 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGA 1
>seq1521951
Length=8986
Score = 176 bits (194), Expect = 7e-42
Identities = 197/255 (77%), Gaps = 15/255 (6%)
Strand=Plus/Plus
Query 16 TCAGTGTAGCGCGCGTGCGG-CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||| |||||| | |||| | |||||| |||||||||||||||||| ||||||||||| |
Sbjct 8089 TCATTGTAGCACTTGTGCAGACCCAGA-CATCTAAGGGCATCACAGGCCTGTTATTGC-T 8146
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCA-T 130
||| || | |||||| | ||| | |||||||||||||| | | ||||||| |
Sbjct 8147 CAATCT-CTGGTGGCTGAACACCACTTGTCCCTCTAAGAAGGTGGGGGACGCCAACCACT 8205
Query 131 AGTCGATGGGGC---TATTTAGCAGGTTAAGGTCTCGTTCGTT----ATCGGAATTAACC 183
| | | | | || |||||| | | | |||||| ||| | |||||||||||
Sbjct 8206 CGGGGGTTGCGTAAGTAGTTAGCATGCCAGAGCCTCGTTTGTTTGTTACCGGAATTAACC 8265
Query 184 AGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAG 243
|||||||| |||||||| ||||||| ||||||||||||||||||| ||||| ||||||
Sbjct 8266 AGACAAATTGCTCCACCAGCTAAGAATGGCCATGCACCACCACCCAAGGAATCGAGAAAG 8325
Query 244 AGCTATCAATCTGTC 258
|||||||||||||||
Sbjct 8326 AGCTATCAATCTGTC 8340
>seq47583
Length=235
Score = 154 bits (170), Expect = 2e-35
Identities = 94/100 (94%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
||||| ||| ||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct 79 GTCTCATTCATTATCTGAATTAACCAGACAAATCACTCCACCAACTAAGAACAGCCATGC 138
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||| |||||||||||||||||| |||||||||
Sbjct 139 ACCACCACCCACAGAATCAAGAAAGAGCTACCAATCTGTC 178
>seq422192
Length=1460
Score = 141 bits (156), Expect = 1e-31
Identities = 181/245 (74%), Gaps = 11/245 (4%)
Strand=Plus/Plus
Query 28 GCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTG 87
||||| ||||| ||||||||||||||||||||||||||||||| ||| || | ||
Sbjct 1147 GCGTGTGGCCCCAGACATCTAAGGGCATCACAGACCTGTTATTGC-TCATTCT-CAGGTG 1204
Query 88 GCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCAT-----AGTCGATGG 139
|||| | |||| | |||||||||||||| | |||| || |||||| |
Sbjct 1205 GCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACACCGACTGCTCGGGAGTCGA-GT 1263
Query 140 GGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCAC 199
|| || | | | | | ||| |||||| | |||||||||| || ||||| | ||||
Sbjct 1264 AACTGGTTGGTATGCCAGAGCCTCCTTCGTTGTTGGAATTAACCGGATAAATCTCCCCAC 1323
Query 200 CAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCC 259
||||||||| ||||| | ||||||||||| | | |||||||||| |||||||||||
Sbjct 1324 CAACTAAGAGTGGCCACGTACCACCACCCAGGGGACAGAGAAAGAGCTGTCAATCTGTCC 1383
Query 260 TCCCT 264
| |||
Sbjct 1384 TTCCT 1388
>seq1128806
Length=366
Score = 140 bits (154), Expect = 5e-31
Identities = 101/117 (86%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| |||||| | || ||||| || ||||||| |||||||||||||||| ||||||||
Sbjct 188 CTAGTTAGCATTTCAAAGTCTCATTTGTTATCGAAATTAACCAGACAAATTGCTCCACCA 129
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||||||||||| | ||| |||||||||| ||||||| ||
Sbjct 128 ACTAAGAACGGCCATGCACCACCACCCACAAAATTGAGAAAGAGCTGTCAATCTATC 72
>seq1611109
Length=12453
Score = 131 bits (144), Expect = 3e-28
Identities = 97/113 (86%), Gaps = 4/113 (4%)
Strand=Plus/Minus
Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205
|||||| | | |||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 8876 TTAGCATGCCAGAGTCTCGTTTGTTATCGGAATTAACCAGACAAATAACTCCACCAA--- 8820
Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||| |||||||| ||||||||| ||||| |||||||||||||||||||||
Sbjct 8819 -GAACAGCCATGCATCACCACCCACGGAATCCAGAAAGAGCTATCAATCTGTC 8768
>seq2412127
Length=597
Score = 122 bits (134), Expect = 1e-25
Identities = 98/117 (84%), Gaps = 1/117 (1%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| |||||| | | |||| |||| ||||| |||||||||||| || | ||||||||
Sbjct 521 CTAGTTAGCATGCCAGAGTCTTGTTCATTATCAGAATTAACCAGAAAACTG-CTCCACCA 463
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||| | | |||| | ||||||||||||||||||||||||||||
Sbjct 462 ACTAAGAACGGCCATGTAACGCCACTTACAGAATCAAGAAAGAGCTATCAATCTGTC 406
>seq2829687
Length=244
Score = 114 bits (126), Expect = 2e-23
Identities = 86/100 (86%), Gaps = 6/100 (6%)
Strand=Plus/Minus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||||||| ||||| ||| |||||||| |||| |||||||||| ||| ||||||||
Sbjct 136 GTCTCGTTTGTTATTGGAGTTAACCAGGCAAA--ACTCCACCAA----GAATGGCCATGC 83
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
| |||||||||| ||||| |||||||||||||||||||||
Sbjct 82 ATCACCACCCATGGAATCCAGAAAGAGCTATCAATCTGTC 43
>seq2142821
Length=237
Score = 93.3 bits (102), Expect = 7e-17
Identities = 61/66 (92%), Gaps = 1/66 (2%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| ||
Sbjct 168 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 226
Query 75 CAAACT 80
||| ||
Sbjct 227 CAATCT 232
>seq1815652
Length=1422
Score = 80.6 bits (88), Expect = 4e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76
||||||||| | |||| |||| | |||||||| ||||||||||||||||| || ||||
Sbjct 966 CAGTGTAGCATGTGTGCAGCCCCGGACATCTAAATGCATCACAGACCTGTTAGTG-CTCA 908
Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA 114
| | || |||||| | |||| | |||||||||| ||
Sbjct 907 ATC-TCGGGTGGCTGAATGCCACTTGTCCCTCTAAAAA 871
>seq1729297
Length=7608
Score = 77.0 bits (84), Expect = 5e-12
Identities = 134/186 (72%), Gaps = 13/186 (7%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGG-CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 73
|| |||||||||| ||||| | |||||| ||||||||||||||| ||| | ||||| | |
Sbjct 7359 GTTAGTGTAGCGCACGTGCAGTCCCAGA-CATCTAAGGGCATCATAGATCAGTTATCG-C 7302
Query 74 TCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA---GCCAGCCACCAACCAT 130
|||| | || ||| || | |||| | ||||||||||| | | | ||| |||
Sbjct 7301 TCAATC-TCGGGTGGATGAATGCCACTTGTCCCTCTAAGCAGTTGGGGGATACCCACC-- 7245
Query 131 AGTCGATGG--GGCTATTTA--GCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGA 186
| || |||| | || || ||| | | ||| ||| | |||| ||||||||||||
Sbjct 7244 ACTCCATGGTAGCATAACTAGTGCATGCCAGAGTCATGTTAGATATCAGAATTAACCAGA 7185
Query 187 CAAATC 192
||||||
Sbjct 7184 CAAATC 7179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 771857556705
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |