Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq2142821 192 1e-46
seq2103126 143 5e-32
seq1729297 111 3e-22
seq2158440 109 1e-21
seq2069642 100 5e-19
seq1521951 100 5e-19
seq422192 96.9 6e-18
seq1172088 95.1 2e-17
>seq2142821
Length=237
Score = 192 bits (212), Expect = 1e-46
Identities = 177/223 (79%), Gaps = 1/223 (0%)
Strand=Plus/Minus
Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165
|| ||||| |||||||||||||||||||||||||||||| | |||| |||||||||||||
Sbjct 232 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTAC 174
Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225
|||||| | || || || | | ||| ||||| ||| |||||| | | || |
Sbjct 173 ACTGACTGGCTCAGCGTGTGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCC 114
Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285
| ||||| ||||||| | | |||||||||||| | | | |||||||||| || ||||||
Sbjct 113 CATTCGTGGTGGGGATCGGGGATTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAG 54
Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||| ||||| ||| |||||||||| ||||||||||||||||
Sbjct 53 TGCGGGTCATAAGCTTGCGTTGATTAAGTCCCTGCCCTTTGTA 11
>seq2103126
Length=233
Score = 143 bits (158), Expect = 5e-32
Identities = 145/189 (77%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
||||| | |||| ||||||||||||||||||| | || || || | | ||| ||||
Sbjct 233 GATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTGCCTACCCTACGCCG 174
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
| ||| |||||| | | || | | ||||| ||||||| | | ||||||||||||
Sbjct 173 GCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCAATTATTC 114
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
| | | |||||||||| || |||||| ||| ||||| ||| |||||||||| |||||||
Sbjct 113 CCCCTGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGATTAAGTCCCTG 54
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 53 CCCTTTGTA 45
>seq1729297
Length=7608
Score = 111 bits (122), Expect = 3e-22
Identities = 165/226 (73%), Gaps = 11/226 (5%)
Strand=Plus/Plus
Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGG-CCGCACGCGCGCTA 164
|| ||||| | ||||| | ||| ||||||||||||||| |||||| | ||||| ||||||
Sbjct 7295 AGATTGAG-CGATAACTGATCTATGATGCCCTTAGATG-TCTGGGACTGCACGTGCGCTA 7352
Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAA- 223
|||| || | || | || | | |||| ||| | |||| ||||| || ||| ||
Sbjct 7353 CACTAACTGGCTCAGCATGTGCCTACCCTTTGCCAGCAGGTGCAGGTAA-CTCGTTGAAC 7411
Query 224 -CTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282
|| | | || ||||||| | |||||||||||| ||| | ||| ||||| || |||
Sbjct 7412 CCTATTTAATGATGGGGATTGGAGATTGCAATTATT-CTCATGAACAAGGAACTCCCAGT 7470
Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| ||| ||||| ||| || |||| ||||||||||||| ||
Sbjct 7471 AAATGCGGGTCATAAGCTTGC----ATTAAGTCCCTGCCCTTTTTA 7512
>seq2158440
Length=211
Score = 109 bits (120), Expect = 1e-21
Identities = 104/133 (78%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255
||||| ||| |||||| | | || | | ||||| ||||||| | | |||||||||
Sbjct 194 GCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCAATT 135
Query 256 ATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315
||| | | | |||||||||| || |||||| ||| ||||| ||| |||||||||| |||
Sbjct 134 ATTCCCCATGAACGAGGAATTCCCAGTAAGGGCGGGTCATAAGCTTGCGTTGATTAAGTC 75
Query 316 CCTGCCCTTTGTA 328
|||||||||||||
Sbjct 74 CCTGCCCTTTGTA 62
>seq2069642
Length=238
Score = 100 bits (110), Expect = 5e-19
Identities = 85/101 (84%), Gaps = 3/101 (3%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 133 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 190
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171
|||||||||||||| | |||| |||||||||||||||||||
Sbjct 191 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGAC 231
>seq1521951
Length=8986
Score = 100 bits (110), Expect = 5e-19
Identities = 156/216 (72%), Gaps = 9/216 (4%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | || | |||| || | ||||| |||||||||| |||||
Sbjct 8186 CTTCTTAGAGGGACAAGTGGTGTTCAGCCACCAGA-GATTGAG-CAATAACAGGCCTGTG 8129
Query 131 ATGCCCTTAGATGTTCTGGGCC-GCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC 189
|||||||||||||| ||||| | |||| | |||||| ||| | || | || | |
Sbjct 8128 ATGCCCTTAGATGT-CTGGGTCTGCACAAGTGCTACAATGATTGGCTCAGTGTGTGCCTA 8070
Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249
||| ||| |||| ||||||| | | || ||| | ||| ||||||| | | |||
Sbjct 8069 CCCTAGGC----AGGTGTGGGTAACCCATTGAATCTCATTTGTGATGGGGATCGGGGATT 8014
Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285
||||||||| | | | ||| |||||| || ||||||
Sbjct 8013 GCAATTATTCCACGTGAACAAGGAATTCCCAGTAAG 7978
>seq422192
Length=1460
Score = 96.9 bits (106), Expect = 6e-18
Identities = 180/258 (70%), Gaps = 11/258 (4%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | |||| ||||||||||||||||
Sbjct 1232 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCTGA-GAATGAG-CAATAACAGGTCTGTG 1175
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| ||||| ||||| || || |||| ||| || |||| |
Sbjct 1174 ATGCCCTTAGATGTCTGGGGCCACACGC-AGCCACGGTGACTAGCCCAGCGTGTTCCT-- 1118
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
| | |||| |||| || |||| | | | | ||||| |||||| | | ||||
Sbjct 1117 -CCTACCCGGCAGGTTTGAGTAACCCACGGAGCCCCGTTCGTGACGGGGATCGGGGATTG 1059
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | | | ||||||||| || || ||| || ||||| ||| | | |
Sbjct 1058 CAATTATTCCCCATGGACGAGGAATTCCCAGGAAGTGCTGGTCATAAGCTTGTG----TC 1003
Query 311 ACGTCCCTGCCCTTTGTA 328
| | |||||||||||||
Sbjct 1002 AAATTCCTGCCCTTTGTA 985
>seq1172088
Length=238
Score = 95.1 bits (104), Expect = 2e-17
Identities = 139/196 (71%), Gaps = 3/196 (2%)
Strand=Plus/Minus
Query 136 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTG 195
||||||||| || | ||| | | |||| |||||| | || | || | | |||
Sbjct 237 CTTAGATGTGTGGGACTGCATGTGTGCTATACTGACTGGCTCAGTGTGTGCCTACCCTAT 178
Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255
|| || |||| ||||||| || | || | | | ||| |||||| | | |||||||||
Sbjct 177 GCTGGCAGGTGTGGGTAACCTGTTGAACCCCATTTGTGATGGGGAGTGGGGATTGCAATT 118
Query 256 ATTGCTCTTCA---ACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312
||| || || | ||||||| || |||||| | | ||||| ||| | ||||||||
Sbjct 117 ATTATTCCCCATGAATGAGGAATTCCCAGTAAGTGTGGGTCATAAGCTTGAGTTGATTAA 58
Query 313 GTCCCTGCCCTTTGTA 328
||||||||||||||||
Sbjct 57 GTCCCTGCCCTTTGTA 42
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 916593079040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |