Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012 -01-05] 3,231,305 sequences; 2,855,365,987 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2127299 279 1e-72 seq2137356 143 8e-32 seq2127087 132 1e-28 seq2174470 129 2e-27 seq1570614 120 9e-25 seq1561134 114 4e-23 seq2437400 113 1e-22 seq1795846 113 1e-22 seq2357093 107 6e-21 seq2086814 104 7e-20 seq1790990 95.1 4e-17 seq2324797 75.2 3e-11 >seq2127299 Length=226 Score = 279 bits (308), Expect = 1e-72 Identities = 197/224 (88%), Gaps = 1/224 (0%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 3 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 62 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 63 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 122 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||| Sbjct 123 CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAG 182 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAAT 225 || |||||||||||||||||||||||||| || |||| Sbjct 183 GCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAAT 226 >seq2137356 Length=217 Score = 143 bits (158), Expect = 8e-32 Identities = 99/111 (89%), Gaps = 1/111 (1%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 107 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 166 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGG 112 |||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 167 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGG 217 >seq2127087 Length=206 Score = 132 bits (146), Expect = 1e-28 Identities = 96/110 (87%), Gaps = 1/110 (1%) Strand=Plus/Minus Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATA 454 |||| ||| ||||||||||||||| ||||||||||||||||||||| | | || Sbjct 186 CAAAGGAACCATAACTGATTTAATGGGCCATTCGCAGTTTCACTGTACCAGCCGTGTGTA 127 Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 126 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 78 >seq2174470 Length=225 Score = 129 bits (142), Expect = 2e-27 Identities = 91/103 (88%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 103 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 44 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTT 104 |||| ||||||| |||||||||||||||||||||||||||||| Sbjct 43 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTT 1 >seq1570614 Length=15922 Score = 120 bits (132), Expect = 9e-25 Identities = 121/152 (80%), Gaps = 9/152 (6%) Strand=Plus/Minus Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AGGTACTA----TCAA 397 |||||| ||| |||||||||| || | |||||||| |||| | ||| | | |||| Sbjct 2820 AGCATGCATTTGCTCTAGAATAACTATAGTTATCCAAGTAGGAGAGGATCAAGTGATCAA 2761 Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCTTATAC 455 | | | ||||||||||| |||||||||| |||||||||||||| || | ||| ||| Sbjct 2760 AGGAGCCATAACTGATTTGATGAGCCATTTGCAGTTTCACTGTACCAGCTGTGCATAT-- 2703 Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAG 487 ||||||||||||||||||||||||| ||||| Sbjct 2702 TTAGACATGCATGGCTTAATCTTTGCAACAAG 2671 >seq1561134 Length=9031 Score = 114 bits (126), Expect = 4e-23 Identities = 88/101 (87%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTA- 452 |||| ||| ||||||||||||||||||||||| |||||| |||||| ||| || Sbjct 2140 CAAAGGAACCATAACTGATTTAATGAGCCATTCACAGTTTTACTGTACTAGCC--CTGGG 2083 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG 493 ||||||||||||||||||||||||||||||||||||||||| Sbjct 2082 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG 2042 >seq2437400 Length=354 Score = 113 bits (124), Expect = 1e-22 Identities = 91/110 (83%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 128 CTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACT 187 ||||||||||||||||||||||| ||||||||| |||||| | |||||||||||| Sbjct 1 CTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAGGCACGG 60 Query 188 ATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 |||||||||||||||||||||||||| || ||||| | |||||| Sbjct 61 CGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCG 110 >seq1795846 Length=3067 Score = 113 bits (124), Expect = 1e-22 Identities = 126/164 (77%), Gaps = 6/164 (4%) Strand=Plus/Minus Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 ||| || ||||||||| |||||||||||| | ||| |||||||||||||| ||||||||| Sbjct 2805 CCTTCCTGTGTCGGGAGTGGGTAATTTGCACCCCTACTGCCTTCCTTGGACGTGGTAGCC 2746 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 | ||| ||||||||| ||||||| |||||| | |||||| |||||| | | || Sbjct 2745 --TCCTCGGGCTCCCTC-ACGGAATCCAACCCTGACTCCCCGCCACCCGTGGTTCACA-C 2690 Query 178 GTAGGCCACTATC--CTACCATCGAAAGTTGATAGGGCAGAAAT 219 | ||| | | | |||||||| ||| || |||||||| || Sbjct 2689 ATTGGCAAATGGCGACTACCATCACAAGCGGACAGGGCAGACAT 2646 >seq2357093 Length=268 Score = 107 bits (118), Expect = 6e-21 Identities = 84/97 (87%), Gaps = 4/97 (4%) Strand=Plus/Minus Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCT 450 |||||| | | |||||||||||||||||||||| ||||||||||||||| || ||| Sbjct 266 ATCAAAGGAGCCATAACTGATTTAATGAGCCATTTGCAGTTTCACTGTATCAGCCGTGCA 207 Query 451 TATACTTAGACATGCATGGCTTAATCTTTGAGACAAG 487 ||| |||||||||| ||||||||||||||||||||| Sbjct 206 TAT--TTAGACATGCCTGGCTTAATCTTTGAGACAAG 172 >seq2086814 Length=219 Score = 104 bits (114), Expect = 7e-20 Identities = 74/84 (88%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||||||| | | |||||||||||||||||||||||||||| Sbjct 219 GCCATTCGCAGTTTCACTGTACCAGCCGTGTGTACTTAGACATGCATGGCTTAATCTTTG 160 Query 481 AGACAAGCATATGACTACTGGCAG 504 ||||||||||||| |||||||||| Sbjct 159 AGACAAGCATATG-CTACTGGCAG 137 >seq1790990 Length=3972 Score = 95.1 bits (104), Expect = 4e-17 Identities = 113/147 (77%), Gaps = 11/147 (7%) Strand=Plus/Minus Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTAT----CAAA 398 ||||||||||| ||||||||| ||||| |||||||| | || ||| || | |||| Sbjct 2301 AGCATGTATTAACTCTAGAATCACCACAGTTATCCAAG-AG--AGGAACAAGTGACCAAA 2245 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAG-ATTGCTTATACT 456 ||| |||||| ||| ||||||||||| ||||||||||||| || ||| | ||| Sbjct 2244 AGAACCATAACTAATTCAATGAGCCATTTACAGTTTCACTGTACCAGTCATGC--ACACT 2187 Query 457 TAGACATGCATGGCTTAATCTTTGAGA 483 |||||| ||| |||||| | ||| ||| Sbjct 2186 TAGACAAGCACGGCTTAGTTTTTCAGA 2160 >seq2324797 Length=1135 Score = 75.2 bits (82), Expect = 3e-11 Identities = 62/76 (82%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 89 GCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACC 148 |||||||||||||| ||||| ||| |||||||||||||||||||| ||||| | | Sbjct 502 GCCTGCTGCCTTCCCTGGATAGGGTGATGGTTTCTCAGGCTCCCTCTCCAGAATCATAGC 561 Query 149 CTAATTCCCCGTTACC 164 || ||||||| || || Sbjct 562 CTGATTCCCCCTTGCC 577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1461594369280