Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq2127299 279 1e-72
seq2137356 143 8e-32
seq2127087 132 1e-28
seq2174470 129 2e-27
seq1570614 120 9e-25
seq1561134 114 4e-23
seq2437400 113 1e-22
seq1795846 113 1e-22
seq2357093 107 6e-21
seq2086814 104 7e-20
seq1790990 95.1 4e-17
seq2324797 75.2 3e-11
>seq2127299
Length=226
Score = 279 bits (308), Expect = 1e-72
Identities = 197/224 (88%), Gaps = 1/224 (0%)
Strand=Plus/Plus
Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||||
Sbjct 3 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 62
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 63 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 122
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
||||||||||||||||||||||||||||| ||||||||| |||||| | ||||||||||
Sbjct 123 CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAG 182
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAAT 225
|| |||||||||||||||||||||||||| || ||||
Sbjct 183 GCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAAT 226
>seq2137356
Length=217
Score = 143 bits (158), Expect = 8e-32
Identities = 99/111 (89%), Gaps = 1/111 (1%)
Strand=Plus/Plus
Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||||
Sbjct 107 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 166
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGG 112
|||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 167 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGG 217
>seq2127087
Length=206
Score = 132 bits (146), Expect = 1e-28
Identities = 96/110 (87%), Gaps = 1/110 (1%)
Strand=Plus/Minus
Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATA 454
|||| ||| ||||||||||||||| ||||||||||||||||||||| | | ||
Sbjct 186 CAAAGGAACCATAACTGATTTAATGGGCCATTCGCAGTTTCACTGTACCAGCCGTGTGTA 127
Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 126 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 78
>seq2174470
Length=225
Score = 129 bits (142), Expect = 2e-27
Identities = 91/103 (88%), Gaps = 1/103 (1%)
Strand=Plus/Minus
Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||||
Sbjct 103 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 44
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTT 104
|||| ||||||| ||||||||||||||||||||||||||||||
Sbjct 43 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTT 1
>seq1570614
Length=15922
Score = 120 bits (132), Expect = 9e-25
Identities = 121/152 (80%), Gaps = 9/152 (6%)
Strand=Plus/Minus
Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AGGTACTA----TCAA 397
|||||| ||| |||||||||| || | |||||||| |||| | ||| | | ||||
Sbjct 2820 AGCATGCATTTGCTCTAGAATAACTATAGTTATCCAAGTAGGAGAGGATCAAGTGATCAA 2761
Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCTTATAC 455
| | | ||||||||||| |||||||||| |||||||||||||| || | ||| |||
Sbjct 2760 AGGAGCCATAACTGATTTGATGAGCCATTTGCAGTTTCACTGTACCAGCTGTGCATAT-- 2703
Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAG 487
||||||||||||||||||||||||| |||||
Sbjct 2702 TTAGACATGCATGGCTTAATCTTTGCAACAAG 2671
>seq1561134
Length=9031
Score = 114 bits (126), Expect = 4e-23
Identities = 88/101 (87%), Gaps = 4/101 (4%)
Strand=Plus/Minus
Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTA- 452
|||| ||| ||||||||||||||||||||||| |||||| |||||| ||| ||
Sbjct 2140 CAAAGGAACCATAACTGATTTAATGAGCCATTCACAGTTTTACTGTACTAGCC--CTGGG 2083
Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG 493
|||||||||||||||||||||||||||||||||||||||||
Sbjct 2082 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG 2042
>seq2437400
Length=354
Score = 113 bits (124), Expect = 1e-22
Identities = 91/110 (83%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 128 CTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACT 187
||||||||||||||||||||||| ||||||||| |||||| | ||||||||||||
Sbjct 1 CTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAGGCACGG 60
Query 188 ATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237
|||||||||||||||||||||||||| || ||||| | ||||||
Sbjct 61 CGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCG 110
>seq1795846
Length=3067
Score = 113 bits (124), Expect = 1e-22
Identities = 126/164 (77%), Gaps = 6/164 (4%)
Strand=Plus/Minus
Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117
||| || ||||||||| |||||||||||| | ||| |||||||||||||| |||||||||
Sbjct 2805 CCTTCCTGTGTCGGGAGTGGGTAATTTGCACCCCTACTGCCTTCCTTGGACGTGGTAGCC 2746
Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177
| ||| ||||||||| ||||||| |||||| | |||||| |||||| | | ||
Sbjct 2745 --TCCTCGGGCTCCCTC-ACGGAATCCAACCCTGACTCCCCGCCACCCGTGGTTCACA-C 2690
Query 178 GTAGGCCACTATC--CTACCATCGAAAGTTGATAGGGCAGAAAT 219
| ||| | | | |||||||| ||| || |||||||| ||
Sbjct 2689 ATTGGCAAATGGCGACTACCATCACAAGCGGACAGGGCAGACAT 2646
>seq2357093
Length=268
Score = 107 bits (118), Expect = 6e-21
Identities = 84/97 (87%), Gaps = 4/97 (4%)
Strand=Plus/Minus
Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCT 450
|||||| | | |||||||||||||||||||||| ||||||||||||||| || |||
Sbjct 266 ATCAAAGGAGCCATAACTGATTTAATGAGCCATTTGCAGTTTCACTGTATCAGCCGTGCA 207
Query 451 TATACTTAGACATGCATGGCTTAATCTTTGAGACAAG 487
||| |||||||||| |||||||||||||||||||||
Sbjct 206 TAT--TTAGACATGCCTGGCTTAATCTTTGAGACAAG 172
>seq2086814
Length=219
Score = 104 bits (114), Expect = 7e-20
Identities = 74/84 (88%), Gaps = 1/84 (1%)
Strand=Plus/Minus
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||||||||| | | ||||||||||||||||||||||||||||
Sbjct 219 GCCATTCGCAGTTTCACTGTACCAGCCGTGTGTACTTAGACATGCATGGCTTAATCTTTG 160
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||| ||||||||||
Sbjct 159 AGACAAGCATATG-CTACTGGCAG 137
>seq1790990
Length=3972
Score = 95.1 bits (104), Expect = 4e-17
Identities = 113/147 (77%), Gaps = 11/147 (7%)
Strand=Plus/Minus
Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTAT----CAAA 398
||||||||||| ||||||||| ||||| |||||||| | || ||| || | ||||
Sbjct 2301 AGCATGTATTAACTCTAGAATCACCACAGTTATCCAAG-AG--AGGAACAAGTGACCAAA 2245
Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAG-ATTGCTTATACT 456
||| |||||| ||| ||||||||||| ||||||||||||| || ||| | |||
Sbjct 2244 AGAACCATAACTAATTCAATGAGCCATTTACAGTTTCACTGTACCAGTCATGC--ACACT 2187
Query 457 TAGACATGCATGGCTTAATCTTTGAGA 483
|||||| ||| |||||| | ||| |||
Sbjct 2186 TAGACAAGCACGGCTTAGTTTTTCAGA 2160
>seq2324797
Length=1135
Score = 75.2 bits (82), Expect = 3e-11
Identities = 62/76 (82%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 89 GCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACC 148
|||||||||||||| ||||| ||| |||||||||||||||||||| ||||| | |
Sbjct 502 GCCTGCTGCCTTCCCTGGATAGGGTGATGGTTTCTCAGGCTCCCTCTCCAGAATCATAGC 561
Query 149 CTAATTCCCCGTTACC 164
|| ||||||| || ||
Sbjct 562 CTGATTCCCCCTTGCC 577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1461594369280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |