Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012
-01-05] 3,231,305 sequences; 2,855,365,987 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1557410 158 9e-34
seq1725941 107 1e-18
>seq1557410
Length=8730
Score = 158 bits (174), Expect = 9e-34
Identities = 593/916 (65%), Gaps = 27/916 (3%)
Strand=Plus/Minus
Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084
||||||| || || ||| || || | | || || | ||||| || || || | |
Sbjct 7440 ATGAACCACTGCTGAGAGAAAACCCCCAGCACTTTGTCATCTTCCCTATTGAATACCATG 7381
Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATT 61144
|||||||| | ||||| || || || || ||||||| ||||||| ||||||||| |||
Sbjct 7380 ATATTTGGTGAATGTATAAGAAAGCTGAGCCTTCCTTTTGGACGGCGGAGGAGGTGGATC 7321
Query 61145 TGTCCAAAGACATGAATGACTGGGA-GCGTTTATCGAGCG-GTGAACA-ACATTTCATTA 61201
| ||||| ||||| | ||||||| || | ||| | ||| | |||||||||
Sbjct 7320 TTTCCAAGGACATTTAGCACTGGGAAGCCCAGA---AGCCTGAGAAGAGACATTTCATAT 7264
Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261
| ||| |||| |||||||| || ||| | | || ||||| || || ||| |
Sbjct 7263 CTCGTGTTCTGGCTTTCTTTGCAGCAAGTGACAGCACAGTAAATGACAACTTGGTGGCGC 7204
Query 61262 GTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
||| | || || || || || || |||||||| |||||||| |||||||
Sbjct 7203 ATTTTGGCCAAGAAGTTCA-------GAAGCCTACTGTTTCTATGGCTTCCAAATTGCCA 7151
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381
| || | || || ||||||| ||| || | || || || ||||| | ||
Sbjct 7150 CAAAAAACATGCATTCTAAGATGTATAGTCTTTTTATTGACACTTACATTAAAGATTCTA 7091
Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441
||| | ||| | ||||||||||| || ||||| || || || ||| ||||
Sbjct 7090 AAGAAAGGGAATTTCTCTTCAATGCCATTGAAACGATGCCTTGTGTCTAGATGAAGGCGG 7031
Query 61442 ATTGGGCCTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGC 61499
||||| |||| |||||| | |||| |||||| | || |||| | | ||
Sbjct 7030 ATTGGACCTTGTGTTGGAT--TGGGGACAAAGAGGCTACCTACGGAGAACATGTTGTAGC 6973
Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559
||||| | || || || | || || ||| | ||||| | || || ||| | ||
Sbjct 6972 CTTTGCCGCAGTGGAAGGCATCTTCTTTTCTGGTTTTTTTGCATCGATATTCTGGCTAAA 6913
Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATG-AGTTGATATCACGCGACGAGG 61618
|||| | ||||| ||||| || || || || | ||| | || || || | || ||||
Sbjct 6912 GAAATGAGGACTGATGCCTGGCCTCACATTTTCCTATGAACTTACTAGCA-GAGATGAGG 6854
Query 61619 GCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGG 61678
| | | |||||| ||||| || | ||||||| | ||||| | || | |
Sbjct 6853 GTTTACGTTGTGACTTTGCCTGCCTGATGTTCAAAC---ACCTGGTACACAAACCATTAG 6797
Query 61679 AGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTG 61738
|| || | || || || || | | || || | || |||||||| ||||| ||||
Sbjct 6796 AGCAGAGAGTAAAAGAAATAATTAGCAATGCTGTTAGGATAGAACAGGAGTTTCTCACTG 6737
Query 61739 ACGCTTTGCCCGTCTCACTCATCGGCATG-AATTGTGGACTAATGTCGCAGTATATTGAA 61797
| || |||| || | | | | ||| ||||| ||||| |||||| ||||
Sbjct 6736 AGGCCTTGCTGGTGAAGCACTTTGCGATGAAATTGCATGTTAATGGAGCAGTACGTTGAG 6677
Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGC--GGATCTATAATACGAAAA 61855
||||| || ||| | || | | || ||||| | ||| || | | | | |||
Sbjct 6676 TTTGTGGCAGACAGACTTAGGCTGGAACTGGGT-TTCAGCAAGGTTTTCCGAGTAG-AAA 6619
Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAAC 61915
| |||||||| || ||||| | ||||| ||||| || ||||| || || || |||||
Sbjct 6618 ATCCATTTGACTTTATGGAGAATATTTCACTGGAAGGAAAGACCAACTTCTTTGAGAAGA 6559
Query 61916 GTGTAGGCGACTATCA 61931
| |||||| | | |||
Sbjct 6558 GAGTAGGCAAATGTCA 6543
>seq1725941
Length=6718
Score = 107 bits (118), Expect = 1e-18
Identities = 110/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108
|||||| || || ||||| |||||||| || ||||| ||||| |||| ||||| ||
Sbjct 1653 GGTATATTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTG 1712
Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168
|| ||||| ||||| || | ||| ||||| | |||||| || || || ||||| ||
Sbjct 1713 GTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTATGGGGTTCCTGTCTCTGTCTG 1772
Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192
|||||||||||||| | ||||||
Sbjct 1773 AGACTCAATGATGGCATACCAAAG 1796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381911164005200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |