Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daubentonia_20madagascariensis_20[genbank_20GCA_5F000241425.1_202012 -01-05] 3,231,305 sequences; 2,855,365,987 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1557410 158 9e-34 seq1725941 107 1e-18 >seq1557410 Length=8730 Score = 158 bits (174), Expect = 9e-34 Identities = 593/916 (65%), Gaps = 27/916 (3%) Strand=Plus/Minus Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084 ||||||| || || ||| || || | | || || | ||||| || || || | | Sbjct 7440 ATGAACCACTGCTGAGAGAAAACCCCCAGCACTTTGTCATCTTCCCTATTGAATACCATG 7381 Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATT 61144 |||||||| | ||||| || || || || ||||||| ||||||| ||||||||| ||| Sbjct 7380 ATATTTGGTGAATGTATAAGAAAGCTGAGCCTTCCTTTTGGACGGCGGAGGAGGTGGATC 7321 Query 61145 TGTCCAAAGACATGAATGACTGGGA-GCGTTTATCGAGCG-GTGAACA-ACATTTCATTA 61201 | ||||| ||||| | ||||||| || | ||| | ||| | ||||||||| Sbjct 7320 TTTCCAAGGACATTTAGCACTGGGAAGCCCAGA---AGCCTGAGAAGAGACATTTCATAT 7264 Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261 | ||| |||| |||||||| || ||| | | || ||||| || || ||| | Sbjct 7263 CTCGTGTTCTGGCTTTCTTTGCAGCAAGTGACAGCACAGTAAATGACAACTTGGTGGCGC 7204 Query 61262 GTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| | || || || || || || |||||||| |||||||| ||||||| Sbjct 7203 ATTTTGGCCAAGAAGTTCA-------GAAGCCTACTGTTTCTATGGCTTCCAAATTGCCA 7151 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 | || | || || ||||||| ||| || | || || || ||||| | || Sbjct 7150 CAAAAAACATGCATTCTAAGATGTATAGTCTTTTTATTGACACTTACATTAAAGATTCTA 7091 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 ||| | ||| | ||||||||||| || ||||| || || || ||| |||| Sbjct 7090 AAGAAAGGGAATTTCTCTTCAATGCCATTGAAACGATGCCTTGTGTCTAGATGAAGGCGG 7031 Query 61442 ATTGGGCCTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGC 61499 ||||| |||| |||||| | |||| |||||| | || |||| | | || Sbjct 7030 ATTGGACCTTGTGTTGGAT--TGGGGACAAAGAGGCTACCTACGGAGAACATGTTGTAGC 6973 Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559 ||||| | || || || | || || ||| | ||||| | || || ||| | || Sbjct 6972 CTTTGCCGCAGTGGAAGGCATCTTCTTTTCTGGTTTTTTTGCATCGATATTCTGGCTAAA 6913 Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATG-AGTTGATATCACGCGACGAGG 61618 |||| | ||||| ||||| || || || || | ||| | || || || | || |||| Sbjct 6912 GAAATGAGGACTGATGCCTGGCCTCACATTTTCCTATGAACTTACTAGCA-GAGATGAGG 6854 Query 61619 GCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGG 61678 | | | |||||| ||||| || | ||||||| | ||||| | || | | Sbjct 6853 GTTTACGTTGTGACTTTGCCTGCCTGATGTTCAAAC---ACCTGGTACACAAACCATTAG 6797 Query 61679 AGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTG 61738 || || | || || || || | | || || | || |||||||| ||||| |||| Sbjct 6796 AGCAGAGAGTAAAAGAAATAATTAGCAATGCTGTTAGGATAGAACAGGAGTTTCTCACTG 6737 Query 61739 ACGCTTTGCCCGTCTCACTCATCGGCATG-AATTGTGGACTAATGTCGCAGTATATTGAA 61797 | || |||| || | | | | ||| ||||| ||||| |||||| |||| Sbjct 6736 AGGCCTTGCTGGTGAAGCACTTTGCGATGAAATTGCATGTTAATGGAGCAGTACGTTGAG 6677 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGC--GGATCTATAATACGAAAA 61855 ||||| || ||| | || | | || ||||| | ||| || | | | | ||| Sbjct 6676 TTTGTGGCAGACAGACTTAGGCTGGAACTGGGT-TTCAGCAAGGTTTTCCGAGTAG-AAA 6619 Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAAC 61915 | |||||||| || ||||| | ||||| ||||| || ||||| || || || ||||| Sbjct 6618 ATCCATTTGACTTTATGGAGAATATTTCACTGGAAGGAAAGACCAACTTCTTTGAGAAGA 6559 Query 61916 GTGTAGGCGACTATCA 61931 | |||||| | | ||| Sbjct 6558 GAGTAGGCAAATGTCA 6543 >seq1725941 Length=6718 Score = 107 bits (118), Expect = 1e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 |||||| || || ||||| |||||||| || ||||| ||||| |||| ||||| || Sbjct 1653 GGTATATTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTG 1712 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || ||||| ||||| || | ||| ||||| | |||||| || || || ||||| || Sbjct 1713 GTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTATGGGGTTCCTGTCTCTGTCTG 1772 Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192 |||||||||||||| | |||||| Sbjct 1773 AGACTCAATGATGGCATACCAAAG 1796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381911164005200