Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06]
38,367 sequences; 2,115,568,035 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq13262 174 2e-41
seq12612 174 2e-41
seq9916 174 2e-41
seq13899 143 4e-32
seq4939 114 2e-23
seq10391 98.7 1e-18
seq5046 95.1 2e-17
>seq13262
Length=5216
Score = 174 bits (192), Expect = 2e-41
Identities = 182/234 (78%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| |
Sbjct 3522 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 3465
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | || ||||||||| | ||||||||||||| ||||| | ||
Sbjct 3464 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 3405
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| |||| |||| ||| | || || ||| ||||||||||||||||||
Sbjct 3404 ACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 3345
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 3344 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 3292
>seq12612
Length=3819
Score = 174 bits (192), Expect = 2e-41
Identities = 182/234 (78%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| |
Sbjct 2835 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 2892
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | || ||||||||| | ||||||||||||| ||||| | ||
Sbjct 2893 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 2952
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| |||| |||| ||| | || || ||| ||||||||||||||||||
Sbjct 2953 ACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 3012
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 3013 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 3065
>seq9916
Length=2300
Score = 174 bits (192), Expect = 2e-41
Identities = 182/234 (78%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| |
Sbjct 782 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 725
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | || ||||||||| | ||||||||||||| ||||| | ||
Sbjct 724 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 665
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| |||| |||| ||| | || || ||| ||||||||||||||||||
Sbjct 664 ACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 605
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 604 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 552
>seq13899
Length=5161
Score = 143 bits (158), Expect = 4e-32
Identities = 165/218 (76%), Gaps = 7/218 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || |||| ||||| ||||| ||| |||||| |||||| |
Sbjct 4948 GTACAAAGGGCAGGGACTTA----ACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 5001
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
||| || | || ||||||||| | ||||||||||||| ||||| | ||
Sbjct 5002 CTCATTCTTGGGGAATAATTGCAATCCCCAATCCCCATCACGAATGGGGTTCAACGGGTT 5061
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| ||||| |||| ||| | || | ||| ||||||||| ||||||||
Sbjct 5062 ACCCGCACCTGCCGGCGTAGGGTAGGCACATGCTGAGCCAGTCAGTGTAGTGCGCGTGCA 5121
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217
|||| | |||||||||||||||||||||||||||||||
Sbjct 5122 GCCCCGTACATCTAAGGGCATCACAGACCTGTTATTGC 5159
>seq4939
Length=37399
Score = 114 bits (126), Expect = 2e-23
Identities = 167/230 (73%), Gaps = 16/230 (7%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||| |||||||| || || | ||||| ||||| ||| |||||| |||||| |
Sbjct 31269 GTACAAAGTGCAGGGACTTA----ACACAAGCTT-ATGACCCGCACTTACTGGGAATT-C 31322
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT----TTCAAAG 116
|| ||| | | || ||||||||| ||| |||||| |||| ||||| |
Sbjct 31323 CTTGTTCATGGGGAATAATTGCAATCCCTGTTCCTCATCAC----AAATGGGGTTCAACG 31378
Query 117 A-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175
|||| || ||||| | || ||| | || || ||| ||||||||| || ||
Sbjct 31379 GGTTACACGCACCTGCCAGCATAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGTGCACG 31438
Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
||| |||| | |||||||||||||||||||||||||||||| ||||| ||
Sbjct 31439 TGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 31487
>seq10391
Length=4239
Score = 98.7 bits (108), Expect = 1e-18
Identities = 164/233 (70%), Gaps = 7/233 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||| |||| |||| || |||| |||| |||||| ||| |||||| |||| |
Sbjct 2258 GTACAAACGGCAAGGACTTA----ACGCAAGCT-GATGACCCGCACTTACTGCGAATG-C 2311
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||| | | | || ||||||||| | ||||||||||||| ||||| | |
Sbjct 2312 CTCACTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAATGGGTT 2371
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||| |||| | || || | | || | ||| |||||||| || || |||
Sbjct 2372 CCCCCGCCTGCCAGCATAGAGTAGACACACACTGAGCCACTCAGTGTACCGTGCATGCAC 2431
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
||| | |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 2432 CCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 2483
>seq5046
Length=4847
Score = 95.1 bits (104), Expect = 2e-17
Identities = 163/233 (70%), Gaps = 8/233 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||| |||| |||| || |||| |||| |||||| || |||||| |||| |
Sbjct 4272 GTACAAACGGCAAGGACTTA----ACGCAAGCT-GATGACCTGCACTTACTGCGAATG-C 4219
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||| | | | || ||||||||| | ||||||||||||| ||||| | |
Sbjct 4218 CTCGCTCATGGGTAATAATTGCAATCTCCGATCCCCATCACGAATGGGGTTCAATGGGTT 4159
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||| |||| | || || | || | ||| |||||||| || || ||| |
Sbjct 4158 CCCCCGCCTGCCAGCATAGAGTAGGCACACACTGAGCCAGTCAGTGTACCGTGCATGCAG 4099
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
||| | ||||||||||||||||||||||||| || |||||| ||| |||||
Sbjct 4098 CCCCGGACATCTAAGGGCATCACAGACCTGT--TTTCCTCAATCTTGGGTGGC 4048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751720496405
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |