Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq13262 174 2e-41 seq12612 174 2e-41 seq9916 174 2e-41 seq13899 143 4e-32 seq4939 114 2e-23 seq10391 98.7 1e-18 seq5046 95.1 2e-17 >seq13262 Length=5216 Score = 174 bits (192), Expect = 2e-41 Identities = 182/234 (78%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| | Sbjct 3522 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 3465 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||||||||||| ||||| | || Sbjct 3464 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 3405 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||| |||| ||| | || || ||| |||||||||||||||||| Sbjct 3404 ACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 3345 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 3344 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 3292 >seq12612 Length=3819 Score = 174 bits (192), Expect = 2e-41 Identities = 182/234 (78%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| | Sbjct 2835 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 2892 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||||||||||| ||||| | || Sbjct 2893 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 2952 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||| |||| ||| | || || ||| |||||||||||||||||| Sbjct 2953 ACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 3012 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 3013 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 3065 >seq9916 Length=2300 Score = 174 bits (192), Expect = 2e-41 Identities = 182/234 (78%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| | Sbjct 782 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 725 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||||||||||| ||||| | || Sbjct 724 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 665 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||| |||| ||| | || || ||| |||||||||||||||||| Sbjct 664 ACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 605 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 604 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 552 >seq13899 Length=5161 Score = 143 bits (158), Expect = 4e-32 Identities = 165/218 (76%), Gaps = 7/218 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||| ||||| ||||| ||| |||||| |||||| | Sbjct 4948 GTACAAAGGGCAGGGACTTA----ACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 5001 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 ||| || | || ||||||||| | ||||||||||||| ||||| | || Sbjct 5002 CTCATTCTTGGGGAATAATTGCAATCCCCAATCCCCATCACGAATGGGGTTCAACGGGTT 5061 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||||| |||| ||| | || | ||| ||||||||| |||||||| Sbjct 5062 ACCCGCACCTGCCGGCGTAGGGTAGGCACATGCTGAGCCAGTCAGTGTAGTGCGCGTGCA 5121 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||| | ||||||||||||||||||||||||||||||| Sbjct 5122 GCCCCGTACATCTAAGGGCATCACAGACCTGTTATTGC 5159 >seq4939 Length=37399 Score = 114 bits (126), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 16/230 (7%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||| |||||||| || || | ||||| ||||| ||| |||||| |||||| | Sbjct 31269 GTACAAAGTGCAGGGACTTA----ACACAAGCTT-ATGACCCGCACTTACTGGGAATT-C 31322 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT----TTCAAAG 116 || ||| | | || ||||||||| ||| |||||| |||| ||||| | Sbjct 31323 CTTGTTCATGGGGAATAATTGCAATCCCTGTTCCTCATCAC----AAATGGGGTTCAACG 31378 Query 117 A-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175 |||| || ||||| | || ||| | || || ||| ||||||||| || || Sbjct 31379 GGTTACACGCACCTGCCAGCATAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGTGCACG 31438 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||| |||| | |||||||||||||||||||||||||||||| ||||| || Sbjct 31439 TGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 31487 >seq10391 Length=4239 Score = 98.7 bits (108), Expect = 1e-18 Identities = 164/233 (70%), Gaps = 7/233 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| |||| |||| || |||| |||| |||||| ||| |||||| |||| | Sbjct 2258 GTACAAACGGCAAGGACTTA----ACGCAAGCT-GATGACCCGCACTTACTGCGAATG-C 2311 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 ||| | | | || ||||||||| | ||||||||||||| ||||| | | Sbjct 2312 CTCACTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAATGGGTT 2371 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| |||| | || || | | || | ||| |||||||| || || ||| Sbjct 2372 CCCCCGCCTGCCAGCATAGAGTAGACACACACTGAGCCACTCAGTGTACCGTGCATGCAC 2431 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 2432 CCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 2483 >seq5046 Length=4847 Score = 95.1 bits (104), Expect = 2e-17 Identities = 163/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| |||| |||| || |||| |||| |||||| || |||||| |||| | Sbjct 4272 GTACAAACGGCAAGGACTTA----ACGCAAGCT-GATGACCTGCACTTACTGCGAATG-C 4219 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||| | | | || ||||||||| | ||||||||||||| ||||| | | Sbjct 4218 CTCGCTCATGGGTAATAATTGCAATCTCCGATCCCCATCACGAATGGGGTTCAATGGGTT 4159 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| |||| | || || | || | ||| |||||||| || || ||| | Sbjct 4158 CCCCCGCCTGCCAGCATAGAGTAGGCACACACTGAGCCAGTCAGTGTACCGTGCATGCAG 4099 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||| | ||||||||||||||||||||||||| || |||||| ||| ||||| Sbjct 4098 CCCCGGACATCTAAGGGCATCACAGACCTGT--TTTCCTCAATCTTGGGTGGC 4048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751720496405