Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06] 38,367 sequences; 2,115,568,035 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq4939 140 6e-31 seq12612 118 2e-24 seq9916 78.8 2e-12 >seq4939 Length=37399 Score = 140 bits (154), Expect = 6e-31 Identities = 193/264 (73%), Gaps = 7/264 (3%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACT-TTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| | | | ||| | | | |||||||| |||||||||| ||| Sbjct 32195 ATGCTCTTAGCTGAGTGTCCTGTAGGGCCCGAAGTGTTTACTTTTAAAAAATTAG--TGT 32138 Query 98 TCAAAGCAGGCCTTTGC-TCGAATACATT--AGCATGGAATAATAGAATAGGACGTGCGG 154 ||||||||||||| || || | ||| ||| |||||||| ||||||||| || || Sbjct 32137 TCAAAGCAGGCCTGAGCCTCCTGGATATTGCAGCTAGGAATAATGGAATAGGAC-TGTGG 32079 Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214 ||||||||||||||||| || || | | |||||||| |||||| | ||||| | Sbjct 32078 TTCTATTTTGTTGGTTTTTATAACTGAGGCCATGATTAAGAGGGATGGCTGGGGGCATTT 32019 Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 ||| | || |||||||||||||||||| | ||||| || | | ||||| Sbjct 32018 GTACTATGCTGCTAGAGGTGAAATTCTTGGACTGGCGCAAGACGTACCAGAGTGAAAGAA 31959 Query 275 TTCACCAAGGATGTTTTCATTAAT 298 || ||||| |||||||||||||| Sbjct 31958 TTTGCCAAGAATGTTTTCATTAAT 31935 >seq12612 Length=3819 Score = 118 bits (130), Expect = 2e-24 Identities = 137/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 |||||||| ||||||||| ||||||||||||||||||||| | || | | ||||| Sbjct 3672 GGAATAATGGAATAGGACC-GCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 3614 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| ||||| | |||||| | ||||| | |||||||||||||||||| Sbjct 3613 TAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGC 3554 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| || | |||||||| || ||||| |||||||||||||||| |||||||| Sbjct 3553 GCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAA 3495 Query 311 GT 312 || Sbjct 3494 GT 3493 >seq9916 Length=2300 Score = 78.8 bits (86), Expect = 2e-12 Identities = 93/125 (74%), Gaps = 1/125 (1%) Strand=Plus/Plus Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||| ||||| | |||||| | ||||| || |||||||||||||||||| Sbjct 1 GATTAAGAGGGACGGCCGGGGGCATTCGTATTGTGCTGCTAGAGGTGAAATTCTTGGACC 60 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 | |||| || | |||||||| || ||||| |||||||||||||||| ||||| Sbjct 61 GGTGCAAGATGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACG 119 Query 308 AAAGT 312 ||||| Sbjct 120 AAAGT 124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914848865216