Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06]
38,367 sequences; 2,115,568,035 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq4939 140 6e-31
seq12612 118 2e-24
seq9916 78.8 2e-12
>seq4939
Length=37399
Score = 140 bits (154), Expect = 6e-31
Identities = 193/264 (73%), Gaps = 7/264 (3%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACT-TTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| | | | ||| | | | |||||||| |||||||||| |||
Sbjct 32195 ATGCTCTTAGCTGAGTGTCCTGTAGGGCCCGAAGTGTTTACTTTTAAAAAATTAG--TGT 32138
Query 98 TCAAAGCAGGCCTTTGC-TCGAATACATT--AGCATGGAATAATAGAATAGGACGTGCGG 154
||||||||||||| || || | ||| ||| |||||||| ||||||||| || ||
Sbjct 32137 TCAAAGCAGGCCTGAGCCTCCTGGATATTGCAGCTAGGAATAATGGAATAGGAC-TGTGG 32079
Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214
||||||||||||||||| || || | | |||||||| |||||| | ||||| |
Sbjct 32078 TTCTATTTTGTTGGTTTTTATAACTGAGGCCATGATTAAGAGGGATGGCTGGGGGCATTT 32019
Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274
||| | || |||||||||||||||||| | ||||| || | | |||||
Sbjct 32018 GTACTATGCTGCTAGAGGTGAAATTCTTGGACTGGCGCAAGACGTACCAGAGTGAAAGAA 31959
Query 275 TTCACCAAGGATGTTTTCATTAAT 298
|| ||||| ||||||||||||||
Sbjct 31958 TTTGCCAAGAATGTTTTCATTAAT 31935
>seq12612
Length=3819
Score = 118 bits (130), Expect = 2e-24
Identities = 137/182 (75%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|||||||| ||||||||| ||||||||||||||||||||| | || | | |||||
Sbjct 3672 GGAATAATGGAATAGGACC-GCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 3614
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||| ||||| | |||||| | ||||| | ||||||||||||||||||
Sbjct 3613 TAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGC 3554
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||| || | |||||||| || ||||| |||||||||||||||| ||||||||
Sbjct 3553 GCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAA 3495
Query 311 GT 312
||
Sbjct 3494 GT 3493
>seq9916
Length=2300
Score = 78.8 bits (86), Expect = 2e-12
Identities = 93/125 (74%), Gaps = 1/125 (1%)
Strand=Plus/Plus
Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247
|||||| ||||| | |||||| | ||||| || ||||||||||||||||||
Sbjct 1 GATTAAGAGGGACGGCCGGGGGCATTCGTATTGTGCTGCTAGAGGTGAAATTCTTGGACC 60
Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307
| |||| || | |||||||| || ||||| |||||||||||||||| |||||
Sbjct 61 GGTGCAAGATGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACG 119
Query 308 AAAGT 312
|||||
Sbjct 120 AAAGT 124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 914848865216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |