Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eulemur_20flavifrons_20[genbank_20GCA_5F001262665.1_202015-08-06]
38,367 sequences; 2,115,568,035 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq13899 149 3e-33
seq3636 149 3e-33
seq10264 118 4e-24
seq6368 95.1 5e-17
seq4939 84.2 9e-14
>seq13899
Length=5161
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 302 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 243
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 242 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 183
Score = 120 bits (132), Expect = 1e-24
Identities = 113/143 (79%), Gaps = 2/143 (1%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||||||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 1870 GAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 1811
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 1810 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTG--A 1753
Query 160 AGAGAGTTAAAAAGCACGTGAAA 182
|||||||| || || |||||||
Sbjct 1752 AGAGAGTTCAAGAGGGCGTGAAA 1730
>seq3636
Length=5015
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 4296 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 4237
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 4236 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 4177
>seq10264
Length=1887
Score = 118 bits (130), Expect = 4e-24
Identities = 122/160 (76%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 1297 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 1356
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 1357 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 1416
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || | ||||| ||| | ||| || ||
Sbjct 1417 AGAGAGTTCAAGAGGGCCTGAAACCGTTAAGAGGTAAACG 1456
>seq6368
Length=114147
Score = 95.1 bits (104), Expect = 5e-17
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 575 GAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCG 634
|||||| |||||||||||||| | |||||||||||||||||||||||||| || |
Sbjct 61422 GAAAGACGGTGAACTATGCCTCGGCAAGGTGAAGCCAGAGGAAACTCTGGTGGCGGTCTG 61481
Query 635 CAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
|||||| || | |||||||| | ||| | |||||||||||||
Sbjct 61482 TAGCGGTCCTAACCTGCAAATCAGTTGTCTGACCTGGGTATAGGGGC 61528
>seq4939
Length=37399
Score = 84.2 bits (92), Expect = 9e-14
Identities = 105/143 (73%), Gaps = 2/143 (1%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||| | |||||||||||||||||| | || | | | |||| | ||||| |||||||
Sbjct 28284 GAGTTGGGTTGTTTGGGAATGCAGCCCAAAGCGAGTGCTAAACTCTATCTAAGGCTAAAT 28225
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||| ||||| ||||||| || | | || ||||||| |||||| |
Sbjct 28224 ACCGGCATGAGACTGATAGTCAACAAGTACTGTAAGGGCAAATTGAAAAGAACTTTG--A 28167
Query 160 AGAGAGTTAAAAAGCACGTGAAA 182
|||||||| | || |||||||
Sbjct 28166 AGAGAGTTCATGAGGGCGTGAAA 28144
Score = 80.6 bits (88), Expect = 1e-12
Identities = 64/77 (83%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666
|||||||||||||||||||||||| | |||||| ||| | ||||||||| ||||| |
Sbjct 27044 AGCCAGAGGAAACTCTGGTGGAGGTCTGTAGCGGTCCTGACATGCAAATCGGTCGTCCGA 26985
Query 667 TTTGGGTATAGGGGCGA 683
||| |||||||||||
Sbjct 26984 CCTGGATATAGGGGCGA 26968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079177027850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |